Hb_000027_190

Information

Type -
Description -
Location Contig27: 279451-288001
Sequence    

Annotation

kegg
ID rcu:RCOM_1310050
description catalytic, putative
nr
ID XP_012082128.1
description PREDICTED: uncharacterized protein LOC105642057 isoform X1 [Jatropha curcas]
swissprot
ID Q5XGR8
description Beta-lactamase-like protein 2 OS=Xenopus laevis GN=lactb2 PE=2 SV=1
trembl
ID A0A067JZN8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18367 PE=4 SV=1
Gene Ontology
ID GO:0009536
description beta-lactamase-like protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28142: 279499-287824 , PASA_asmbl_28143: 283103-283440
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000027_190 0.0 - - PREDICTED: uncharacterized protein LOC105642057 isoform X1 [Jatropha curcas]
2 Hb_000661_030 0.0787968568 - - PREDICTED: uncharacterized protein LOC105650374 [Jatropha curcas]
3 Hb_000679_020 0.0870214341 transcription factor TF Family: HB PREDICTED: transcription initiation factor TFIID subunit 11 [Jatropha curcas]
4 Hb_001435_030 0.0893221329 - - PREDICTED: uncharacterized protein LOC105645073 [Jatropha curcas]
5 Hb_000005_190 0.0911241252 - - hypothetical protein JCGZ_05438 [Jatropha curcas]
6 Hb_010710_070 0.0911870123 - - PREDICTED: protein TOC75-3, chloroplastic-like [Populus euphratica]
7 Hb_007441_130 0.0929247544 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_188063_020 0.0930879473 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003929_110 0.0931884885 - - PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic isoform X1 [Jatropha curcas]
10 Hb_000864_030 0.094769451 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Jatropha curcas]
11 Hb_008387_020 0.0953953797 - - PREDICTED: FHA domain-containing protein DDL isoform X1 [Jatropha curcas]
12 Hb_007426_110 0.09625122 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Jatropha curcas]
13 Hb_002849_100 0.0978287716 - - PREDICTED: mechanosensitive ion channel protein 1, mitochondrial [Jatropha curcas]
14 Hb_127552_040 0.0980285496 - - Uncharacterized protein L484_000643 [Morus notabilis]
15 Hb_002909_050 0.0984650114 - - conserved hypothetical protein [Ricinus communis]
16 Hb_021443_040 0.0992854525 - - acc synthase, putative [Ricinus communis]
17 Hb_000076_130 0.1042632706 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
18 Hb_002600_150 0.1045608659 - - PREDICTED: uncharacterized protein LOC105646805 isoform X1 [Jatropha curcas]
19 Hb_004800_180 0.1045960694 - - PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Populus euphratica]
20 Hb_012733_030 0.1060803541 - - hypothetical protein OsI_15243 [Oryza sativa Indica Group]

Gene co-expression network

sample Hb_000027_190 Hb_000027_190 Hb_000661_030 Hb_000661_030 Hb_000027_190--Hb_000661_030 Hb_000679_020 Hb_000679_020 Hb_000027_190--Hb_000679_020 Hb_001435_030 Hb_001435_030 Hb_000027_190--Hb_001435_030 Hb_000005_190 Hb_000005_190 Hb_000027_190--Hb_000005_190 Hb_010710_070 Hb_010710_070 Hb_000027_190--Hb_010710_070 Hb_007441_130 Hb_007441_130 Hb_000027_190--Hb_007441_130 Hb_000661_030--Hb_000679_020 Hb_001259_020 Hb_001259_020 Hb_000661_030--Hb_001259_020 Hb_188126_010 Hb_188126_010 Hb_000661_030--Hb_188126_010 Hb_000815_170 Hb_000815_170 Hb_000661_030--Hb_000815_170 Hb_000906_100 Hb_000906_100 Hb_000661_030--Hb_000906_100 Hb_000864_030 Hb_000864_030 Hb_000679_020--Hb_000864_030 Hb_000174_170 Hb_000174_170 Hb_000679_020--Hb_000174_170 Hb_000563_420 Hb_000563_420 Hb_000679_020--Hb_000563_420 Hb_004920_090 Hb_004920_090 Hb_000679_020--Hb_004920_090 Hb_000679_020--Hb_000906_100 Hb_036790_080 Hb_036790_080 Hb_001435_030--Hb_036790_080 Hb_000261_060 Hb_000261_060 Hb_001435_030--Hb_000261_060 Hb_002055_040 Hb_002055_040 Hb_001435_030--Hb_002055_040 Hb_005253_030 Hb_005253_030 Hb_001435_030--Hb_005253_030 Hb_003467_030 Hb_003467_030 Hb_001435_030--Hb_003467_030 Hb_000005_190--Hb_188126_010 Hb_000005_190--Hb_010710_070 Hb_012733_030 Hb_012733_030 Hb_000005_190--Hb_012733_030 Hb_003544_140 Hb_003544_140 Hb_000005_190--Hb_003544_140 Hb_002095_010 Hb_002095_010 Hb_000005_190--Hb_002095_010 Hb_000207_180 Hb_000207_180 Hb_000005_190--Hb_000207_180 Hb_004963_030 Hb_004963_030 Hb_010710_070--Hb_004963_030 Hb_028912_050 Hb_028912_050 Hb_010710_070--Hb_028912_050 Hb_188063_020 Hb_188063_020 Hb_010710_070--Hb_188063_020 Hb_004994_380 Hb_004994_380 Hb_010710_070--Hb_004994_380 Hb_002849_100 Hb_002849_100 Hb_010710_070--Hb_002849_100 Hb_001442_040 Hb_001442_040 Hb_010710_070--Hb_001442_040 Hb_000044_040 Hb_000044_040 Hb_007441_130--Hb_000044_040 Hb_000008_290 Hb_000008_290 Hb_007441_130--Hb_000008_290 Hb_023480_010 Hb_023480_010 Hb_007441_130--Hb_023480_010 Hb_004097_070 Hb_004097_070 Hb_007441_130--Hb_004097_070 Hb_007062_020 Hb_007062_020 Hb_007441_130--Hb_007062_020 Hb_006909_070 Hb_006909_070 Hb_007441_130--Hb_006909_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.2482 20.995 27.17 18.8305 31.1634 36.2698
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
28.7136 16.6349 30.3101 38.4454 57.5112

CAGE analysis