Hb_000005_010

Information

Type -
Description -
Location Contig5: 18021-35735
Sequence    

Annotation

kegg
ID rcu:RCOM_0476130
description retinoid-inducible serine carboxypeptidase, putative (EC:3.4.16.6)
nr
ID XP_012064663.1
description PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
swissprot
ID Q67Y83
description Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2
trembl
ID A0A067L645
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05408 PE=4 SV=1
Gene Ontology
ID GO:0004185
description serine carboxypeptidase-like 51

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000005_010 0.0 - - PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
2 Hb_000176_050 0.096021976 - - glutamine amidotransferase class-I domain-containing family protein [Populus trichocarpa]
3 Hb_004032_190 0.0995716285 - - PREDICTED: probable cellulose synthase A catalytic subunit 3 [UDP-forming] isoform X1 [Jatropha curcas]
4 Hb_001289_070 0.108164774 - - PREDICTED: protein YLS9-like [Jatropha curcas]
5 Hb_163950_050 0.1105193917 - - protein binding protein, putative [Ricinus communis]
6 Hb_002119_110 0.1150002959 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Jatropha curcas]
7 Hb_002925_060 0.1153115742 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01547 [Jatropha curcas]
8 Hb_000813_070 0.1166535896 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000364_090 0.1193379536 - - PREDICTED: filament-like plant protein 7 isoform X2 [Jatropha curcas]
10 Hb_000963_120 0.1229126722 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
11 Hb_000103_130 0.1233515228 - - PREDICTED: protein NETWORKED 1A [Jatropha curcas]
12 Hb_005711_030 0.1236383734 - - hypothetical protein RCOM_0460020 [Ricinus communis]
13 Hb_015807_130 0.124775952 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
14 Hb_006920_020 0.1249210161 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
15 Hb_001408_200 0.1252577589 - - hypothetical protein JCGZ_08964 [Jatropha curcas]
16 Hb_005000_150 0.1253764783 - - conserved hypothetical protein [Ricinus communis]
17 Hb_016277_030 0.125798001 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
18 Hb_005183_050 0.1278090529 - - hypothetical protein RCOM_1590900 [Ricinus communis]
19 Hb_003152_020 0.127966177 - - PREDICTED: neutral alpha-glucosidase C [Jatropha curcas]
20 Hb_001699_080 0.1317967261 - - unnamed protein product [Coffea canephora]

Gene co-expression network

sample Hb_000005_010 Hb_000005_010 Hb_000176_050 Hb_000176_050 Hb_000005_010--Hb_000176_050 Hb_004032_190 Hb_004032_190 Hb_000005_010--Hb_004032_190 Hb_001289_070 Hb_001289_070 Hb_000005_010--Hb_001289_070 Hb_163950_050 Hb_163950_050 Hb_000005_010--Hb_163950_050 Hb_002119_110 Hb_002119_110 Hb_000005_010--Hb_002119_110 Hb_002925_060 Hb_002925_060 Hb_000005_010--Hb_002925_060 Hb_000122_230 Hb_000122_230 Hb_000176_050--Hb_000122_230 Hb_080797_010 Hb_080797_010 Hb_000176_050--Hb_080797_010 Hb_006920_020 Hb_006920_020 Hb_000176_050--Hb_006920_020 Hb_001408_200 Hb_001408_200 Hb_000176_050--Hb_001408_200 Hb_001097_140 Hb_001097_140 Hb_000176_050--Hb_001097_140 Hb_000364_090 Hb_000364_090 Hb_004032_190--Hb_000364_090 Hb_016277_030 Hb_016277_030 Hb_004032_190--Hb_016277_030 Hb_001206_100 Hb_001206_100 Hb_004032_190--Hb_001206_100 Hb_009421_070 Hb_009421_070 Hb_004032_190--Hb_009421_070 Hb_004466_090 Hb_004466_090 Hb_004032_190--Hb_004466_090 Hb_000784_060 Hb_000784_060 Hb_004032_190--Hb_000784_060 Hb_005711_030 Hb_005711_030 Hb_001289_070--Hb_005711_030 Hb_015807_130 Hb_015807_130 Hb_001289_070--Hb_015807_130 Hb_005000_150 Hb_005000_150 Hb_001289_070--Hb_005000_150 Hb_003152_020 Hb_003152_020 Hb_001289_070--Hb_003152_020 Hb_000813_070 Hb_000813_070 Hb_001289_070--Hb_000813_070 Hb_002151_070 Hb_002151_070 Hb_001289_070--Hb_002151_070 Hb_002613_040 Hb_002613_040 Hb_163950_050--Hb_002613_040 Hb_015934_090 Hb_015934_090 Hb_163950_050--Hb_015934_090 Hb_000103_130 Hb_000103_130 Hb_163950_050--Hb_000103_130 Hb_002986_030 Hb_002986_030 Hb_163950_050--Hb_002986_030 Hb_163950_050--Hb_004032_190 Hb_163950_050--Hb_001206_100 Hb_000963_120 Hb_000963_120 Hb_002119_110--Hb_000963_120 Hb_004374_030 Hb_004374_030 Hb_002119_110--Hb_004374_030 Hb_002119_110--Hb_016277_030 Hb_002119_110--Hb_000784_060 Hb_002119_110--Hb_004032_190 Hb_012239_060 Hb_012239_060 Hb_002119_110--Hb_012239_060 Hb_002925_060--Hb_001408_200 Hb_000620_050 Hb_000620_050 Hb_002925_060--Hb_000620_050 Hb_182869_010 Hb_182869_010 Hb_002925_060--Hb_182869_010 Hb_003058_240 Hb_003058_240 Hb_002925_060--Hb_003058_240 Hb_047612_010 Hb_047612_010 Hb_002925_060--Hb_047612_010 Hb_000402_060 Hb_000402_060 Hb_002925_060--Hb_000402_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00873607 0.116771 0.218598 0.967367 0 0.00829699
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0312217 0 0.0868592 0.926733

CAGE analysis