Hb_000003_260

Information

Type -
Description -
Location Contig3: 151645-157347
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000003_260 0.0 - - -
2 Hb_000086_040 0.2115316859 - - PREDICTED: legumin A-like [Jatropha curcas]
3 Hb_001461_020 0.2209504403 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
4 Hb_000329_050 0.2685949221 - - -
5 Hb_000427_080 0.2859850727 - - PREDICTED: uncharacterized protein LOC105775598 [Gossypium raimondii]
6 Hb_000116_300 0.2947801877 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_018202_030 0.3090893853 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
8 Hb_000976_230 0.3228567328 - - PREDICTED: probable terpene synthase 4 [Jatropha curcas]
9 Hb_179022_010 0.331481398 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_135611_010 0.3330125831 - - PREDICTED: uncharacterized protein LOC105142085 [Populus euphratica]
11 Hb_012146_030 0.3349267647 - - -
12 Hb_001416_050 0.3364212304 - - PREDICTED: uncharacterized protein LOC104107076 [Nicotiana tomentosiformis]
13 Hb_000062_150 0.3364569347 - - PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
14 Hb_034482_030 0.3365451179 - - PREDICTED: histidine--tRNA ligase [Jatropha curcas]
15 Hb_095595_010 0.3397454187 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
16 Hb_003544_180 0.3399651769 - - PREDICTED: uncharacterized protein LOC105630509 [Jatropha curcas]
17 Hb_000135_030 0.3416631485 - - PREDICTED: uncharacterized protein LOC105634729 isoform X1 [Jatropha curcas]
18 Hb_068804_100 0.3437647989 - - PREDICTED: surfeit locus protein 6 [Jatropha curcas]
19 Hb_120762_010 0.3444468224 - - -
20 Hb_185447_010 0.3453577432 - - hypothetical protein JCGZ_13512 [Jatropha curcas]

Gene co-expression network

sample Hb_000003_260 Hb_000003_260 Hb_000086_040 Hb_000086_040 Hb_000003_260--Hb_000086_040 Hb_001461_020 Hb_001461_020 Hb_000003_260--Hb_001461_020 Hb_000329_050 Hb_000329_050 Hb_000003_260--Hb_000329_050 Hb_000427_080 Hb_000427_080 Hb_000003_260--Hb_000427_080 Hb_000116_300 Hb_000116_300 Hb_000003_260--Hb_000116_300 Hb_018202_030 Hb_018202_030 Hb_000003_260--Hb_018202_030 Hb_000086_040--Hb_018202_030 Hb_004117_350 Hb_004117_350 Hb_000086_040--Hb_004117_350 Hb_185447_010 Hb_185447_010 Hb_000086_040--Hb_185447_010 Hb_003435_010 Hb_003435_010 Hb_000086_040--Hb_003435_010 Hb_003780_070 Hb_003780_070 Hb_000086_040--Hb_003780_070 Hb_023675_030 Hb_023675_030 Hb_001461_020--Hb_023675_030 Hb_085083_020 Hb_085083_020 Hb_001461_020--Hb_085083_020 Hb_000236_450 Hb_000236_450 Hb_001461_020--Hb_000236_450 Hb_001417_020 Hb_001417_020 Hb_001461_020--Hb_001417_020 Hb_000964_070 Hb_000964_070 Hb_001461_020--Hb_000964_070 Hb_000805_260 Hb_000805_260 Hb_000329_050--Hb_000805_260 Hb_002843_050 Hb_002843_050 Hb_000329_050--Hb_002843_050 Hb_020499_010 Hb_020499_010 Hb_000329_050--Hb_020499_010 Hb_135611_010 Hb_135611_010 Hb_000329_050--Hb_135611_010 Hb_052764_090 Hb_052764_090 Hb_000329_050--Hb_052764_090 Hb_002192_070 Hb_002192_070 Hb_000329_050--Hb_002192_070 Hb_095853_010 Hb_095853_010 Hb_000427_080--Hb_095853_010 Hb_000427_080--Hb_001461_020 Hb_006054_050 Hb_006054_050 Hb_000427_080--Hb_006054_050 Hb_137276_010 Hb_137276_010 Hb_000427_080--Hb_137276_010 Hb_000062_110 Hb_000062_110 Hb_000427_080--Hb_000062_110 Hb_006076_010 Hb_006076_010 Hb_000116_300--Hb_006076_010 Hb_000792_070 Hb_000792_070 Hb_000116_300--Hb_000792_070 Hb_000041_150 Hb_000041_150 Hb_000116_300--Hb_000041_150 Hb_013405_030 Hb_013405_030 Hb_000116_300--Hb_013405_030 Hb_001221_170 Hb_001221_170 Hb_000116_300--Hb_001221_170 Hb_000997_210 Hb_000997_210 Hb_000116_300--Hb_000997_210 Hb_012146_030 Hb_012146_030 Hb_018202_030--Hb_012146_030 Hb_006649_070 Hb_006649_070 Hb_018202_030--Hb_006649_070 Hb_044187_010 Hb_044187_010 Hb_018202_030--Hb_044187_010 Hb_018202_030--Hb_006054_050 Hb_164804_010 Hb_164804_010 Hb_018202_030--Hb_164804_010 Hb_101832_010 Hb_101832_010 Hb_018202_030--Hb_101832_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.50432 0.128293 0.0611724 0.139564 0.863559 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.263684 0.138181 0.612085 0.169127 1.08484

CAGE analysis