Hb_002192_070

Information

Type -
Description -
Location Contig2192: 86996-89172
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002192_070 0.0 - - -
2 Hb_000849_150 0.1129800046 - - hypothetical protein JCGZ_15099 [Jatropha curcas]
3 Hb_003813_200 0.1362349168 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_000544_040 0.1408197592 - - PREDICTED: mitogen-activated protein kinase 9-like [Jatropha curcas]
5 Hb_000815_100 0.1425057907 - - -
6 Hb_000025_750 0.1430704505 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
7 Hb_002897_040 0.1433174581 - - PREDICTED: LOW QUALITY PROTEIN: protein NETWORKED 4A [Jatropha curcas]
8 Hb_001473_190 0.1443911616 - - 50S ribosomal protein L20 [Hevea brasiliensis]
9 Hb_000692_170 0.1485376054 - - PREDICTED: uncharacterized protein LOC105638529 [Jatropha curcas]
10 Hb_007305_010 0.1501002174 - - PREDICTED: girdin-like [Jatropha curcas]
11 Hb_030414_050 0.1508374819 - - -
12 Hb_007416_200 0.1520228467 - - PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Jatropha curcas]
13 Hb_000093_130 0.1531664565 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
14 Hb_000684_300 0.1548216089 transcription factor TF Family: NF-YB hypothetical protein CICLE_v10012920mg [Citrus clementina]
15 Hb_000879_130 0.1567511621 - - -
16 Hb_060437_010 0.167736412 - - E3 ubiquitin protein ligase RIE1 [Morus notabilis]
17 Hb_007765_060 0.1690071531 - - Proliferating cell nuclear antigen [Theobroma cacao]
18 Hb_005725_070 0.1701235639 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000173_370 0.1719671101 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Jatropha curcas]
20 Hb_002276_050 0.1726416769 - - PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_002192_070 Hb_002192_070 Hb_000849_150 Hb_000849_150 Hb_002192_070--Hb_000849_150 Hb_003813_200 Hb_003813_200 Hb_002192_070--Hb_003813_200 Hb_000544_040 Hb_000544_040 Hb_002192_070--Hb_000544_040 Hb_000815_100 Hb_000815_100 Hb_002192_070--Hb_000815_100 Hb_000025_750 Hb_000025_750 Hb_002192_070--Hb_000025_750 Hb_002897_040 Hb_002897_040 Hb_002192_070--Hb_002897_040 Hb_000849_150--Hb_000025_750 Hb_004032_460 Hb_004032_460 Hb_000849_150--Hb_004032_460 Hb_060437_010 Hb_060437_010 Hb_000849_150--Hb_060437_010 Hb_001408_090 Hb_001408_090 Hb_000849_150--Hb_001408_090 Hb_000849_150--Hb_002897_040 Hb_005725_070 Hb_005725_070 Hb_000849_150--Hb_005725_070 Hb_007416_200 Hb_007416_200 Hb_003813_200--Hb_007416_200 Hb_000093_130 Hb_000093_130 Hb_003813_200--Hb_000093_130 Hb_000692_170 Hb_000692_170 Hb_003813_200--Hb_000692_170 Hb_001956_050 Hb_001956_050 Hb_003813_200--Hb_001956_050 Hb_003813_200--Hb_000025_750 Hb_000684_300 Hb_000684_300 Hb_003813_200--Hb_000684_300 Hb_000544_040--Hb_000849_150 Hb_000544_040--Hb_005725_070 Hb_007305_010 Hb_007305_010 Hb_000544_040--Hb_007305_010 Hb_000300_540 Hb_000300_540 Hb_000544_040--Hb_000300_540 Hb_007786_010 Hb_007786_010 Hb_000544_040--Hb_007786_010 Hb_000173_370 Hb_000173_370 Hb_000544_040--Hb_000173_370 Hb_000815_100--Hb_000849_150 Hb_007765_060 Hb_007765_060 Hb_000815_100--Hb_007765_060 Hb_030414_050 Hb_030414_050 Hb_000815_100--Hb_030414_050 Hb_095471_010 Hb_095471_010 Hb_000815_100--Hb_095471_010 Hb_000815_100--Hb_000544_040 Hb_001227_110 Hb_001227_110 Hb_000025_750--Hb_001227_110 Hb_000025_750--Hb_001408_090 Hb_000025_750--Hb_000692_170 Hb_000025_750--Hb_000093_130 Hb_002025_140 Hb_002025_140 Hb_000025_750--Hb_002025_140 Hb_006631_010 Hb_006631_010 Hb_002897_040--Hb_006631_010 Hb_000173_210 Hb_000173_210 Hb_002897_040--Hb_000173_210 Hb_000544_120 Hb_000544_120 Hb_002897_040--Hb_000544_120 Hb_002897_040--Hb_000025_750 Hb_002897_040--Hb_000173_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.37771 0.509734 0.365407 0.0251716 1.62953 0.667184
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.380911 0.299527 0.362697 0.181575 0.20132

CAGE analysis