Hb_177321_040

Information

Type -
Description -
Location Contig177321: 5623-8034
Sequence    

Annotation

kegg
ID rcu:RCOM_1491960
description hypothetical protein
nr
ID KDP37272.1
description hypothetical protein JCGZ_06328 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KME9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06328 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_177321_040 0.0 - - hypothetical protein JCGZ_06328 [Jatropha curcas]
2 Hb_002235_050 0.1231430092 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
3 Hb_001946_220 0.1761953803 - - PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Jatropha curcas]
4 Hb_002913_010 0.1801077537 - - PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X1 [Jatropha curcas]
5 Hb_003659_010 0.1847228456 - - aldo/keto reductase AKR [Manihot esculenta]
6 Hb_001123_220 0.1875822882 - - -
7 Hb_007576_140 0.1924000664 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis]
8 Hb_002849_090 0.1947444896 - - hypothetical protein POPTR_0002s16380g [Populus trichocarpa]
9 Hb_008749_020 0.1964933882 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000173_260 0.197335618 - - hypothetical protein L484_010046 [Morus notabilis]
11 Hb_001414_020 0.1985457279 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
12 Hb_001500_070 0.2031023017 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000406_090 0.2070813288 - - unknown [Populus trichocarpa]
14 Hb_000679_110 0.210095092 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
15 Hb_000172_280 0.2127701185 - - aspartate aminotransferase, putative [Ricinus communis]
16 Hb_001195_220 0.2148489028 - - sugar transporter, putative [Ricinus communis]
17 Hb_001776_010 0.2155143056 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
18 Hb_000678_010 0.2168182942 - - PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Jatropha curcas]
19 Hb_000327_070 0.219923998 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X2 [Jatropha curcas]
20 Hb_000120_720 0.2209525521 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_177321_040 Hb_177321_040 Hb_002235_050 Hb_002235_050 Hb_177321_040--Hb_002235_050 Hb_001946_220 Hb_001946_220 Hb_177321_040--Hb_001946_220 Hb_002913_010 Hb_002913_010 Hb_177321_040--Hb_002913_010 Hb_003659_010 Hb_003659_010 Hb_177321_040--Hb_003659_010 Hb_001123_220 Hb_001123_220 Hb_177321_040--Hb_001123_220 Hb_007576_140 Hb_007576_140 Hb_177321_040--Hb_007576_140 Hb_002235_050--Hb_002913_010 Hb_000679_110 Hb_000679_110 Hb_002235_050--Hb_000679_110 Hb_010872_050 Hb_010872_050 Hb_002235_050--Hb_010872_050 Hb_007185_040 Hb_007185_040 Hb_002235_050--Hb_007185_040 Hb_000678_010 Hb_000678_010 Hb_002235_050--Hb_000678_010 Hb_000120_720 Hb_000120_720 Hb_001946_220--Hb_000120_720 Hb_000742_010 Hb_000742_010 Hb_001946_220--Hb_000742_010 Hb_001946_220--Hb_002913_010 Hb_000320_300 Hb_000320_300 Hb_001946_220--Hb_000320_300 Hb_007919_020 Hb_007919_020 Hb_001946_220--Hb_007919_020 Hb_001205_080 Hb_001205_080 Hb_001946_220--Hb_001205_080 Hb_002913_010--Hb_000678_010 Hb_000229_050 Hb_000229_050 Hb_002913_010--Hb_000229_050 Hb_000296_010 Hb_000296_010 Hb_002913_010--Hb_000296_010 Hb_002913_010--Hb_000742_010 Hb_133004_010 Hb_133004_010 Hb_002913_010--Hb_133004_010 Hb_001195_220 Hb_001195_220 Hb_003659_010--Hb_001195_220 Hb_003659_010--Hb_007576_140 Hb_002701_160 Hb_002701_160 Hb_003659_010--Hb_002701_160 Hb_001240_050 Hb_001240_050 Hb_003659_010--Hb_001240_050 Hb_003659_010--Hb_000679_110 Hb_003659_010--Hb_002235_050 Hb_001369_230 Hb_001369_230 Hb_001123_220--Hb_001369_230 Hb_000559_070 Hb_000559_070 Hb_001123_220--Hb_000559_070 Hb_003626_050 Hb_003626_050 Hb_001123_220--Hb_003626_050 Hb_001123_220--Hb_002235_050 Hb_004129_050 Hb_004129_050 Hb_001123_220--Hb_004129_050 Hb_009732_020 Hb_009732_020 Hb_001123_220--Hb_009732_020 Hb_007576_140--Hb_001195_220 Hb_007123_080 Hb_007123_080 Hb_007576_140--Hb_007123_080 Hb_007576_140--Hb_000679_110 Hb_025787_010 Hb_025787_010 Hb_007576_140--Hb_025787_010 Hb_000567_090 Hb_000567_090 Hb_007576_140--Hb_000567_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.209219 0.139374 0.698572 0.219207 0.0325224 0.0321235
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.191402 0.120452 0.056154 0.867769 0.24994

CAGE analysis