Hb_162547_010

Information

Type -
Description -
Location Contig162547: 271-570
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14751: 257-590
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162547_010 0.0 - - -
2 Hb_004117_120 0.1660997894 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
3 Hb_001124_220 0.168137234 - - DsRNA-binding protein 5, putative isoform 1 [Theobroma cacao]
4 Hb_126757_010 0.1693815568 - - protein phosphatase 2c, putative [Ricinus communis]
5 Hb_003925_020 0.182418951 - - PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Jatropha curcas]
6 Hb_009646_040 0.1934856485 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_002272_280 0.1937716816 - - phosphoglycerate mutase, putative [Ricinus communis]
8 Hb_000066_090 0.1948973502 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
9 Hb_005183_170 0.1978035188 - - PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curcas]
10 Hb_000792_090 0.2020899 - - 3-beta-hydroxy-delta5-steroid dehydrogenase, putative [Ricinus communis]
11 Hb_004129_140 0.2029304295 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Jatropha curcas]
12 Hb_001486_190 0.205679618 - - hypothetical protein JCGZ_02702 [Jatropha curcas]
13 Hb_000264_110 0.2072445057 - - PREDICTED: trafficking protein particle complex subunit 13 [Jatropha curcas]
14 Hb_000069_740 0.2088819415 - - Esterase precursor, putative [Ricinus communis]
15 Hb_183610_010 0.2097966286 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
16 Hb_000212_450 0.2104549936 - - PREDICTED: basic leucine zipper and W2 domain-containing protein 2 [Jatropha curcas]
17 Hb_000521_130 0.2146274634 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
18 Hb_003470_090 0.215355233 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
19 Hb_000032_070 0.2190397301 - - hypothetical protein POPTR_0003s13760g [Populus trichocarpa]
20 Hb_000733_080 0.2192782628 - - PREDICTED: uncharacterized protein LOC105646960 [Jatropha curcas]

Gene co-expression network

sample Hb_162547_010 Hb_162547_010 Hb_004117_120 Hb_004117_120 Hb_162547_010--Hb_004117_120 Hb_001124_220 Hb_001124_220 Hb_162547_010--Hb_001124_220 Hb_126757_010 Hb_126757_010 Hb_162547_010--Hb_126757_010 Hb_003925_020 Hb_003925_020 Hb_162547_010--Hb_003925_020 Hb_009646_040 Hb_009646_040 Hb_162547_010--Hb_009646_040 Hb_002272_280 Hb_002272_280 Hb_162547_010--Hb_002272_280 Hb_183610_010 Hb_183610_010 Hb_004117_120--Hb_183610_010 Hb_005183_170 Hb_005183_170 Hb_004117_120--Hb_005183_170 Hb_024074_020 Hb_024074_020 Hb_004117_120--Hb_024074_020 Hb_000984_310 Hb_000984_310 Hb_004117_120--Hb_000984_310 Hb_000291_160 Hb_000291_160 Hb_004117_120--Hb_000291_160 Hb_003680_190 Hb_003680_190 Hb_001124_220--Hb_003680_190 Hb_002194_090 Hb_002194_090 Hb_001124_220--Hb_002194_090 Hb_000792_090 Hb_000792_090 Hb_001124_220--Hb_000792_090 Hb_000384_110 Hb_000384_110 Hb_001124_220--Hb_000384_110 Hb_001124_220--Hb_126757_010 Hb_000465_270 Hb_000465_270 Hb_126757_010--Hb_000465_270 Hb_004627_030 Hb_004627_030 Hb_126757_010--Hb_004627_030 Hb_007926_050 Hb_007926_050 Hb_126757_010--Hb_007926_050 Hb_001486_190 Hb_001486_190 Hb_126757_010--Hb_001486_190 Hb_000402_130 Hb_000402_130 Hb_126757_010--Hb_000402_130 Hb_075247_010 Hb_075247_010 Hb_126757_010--Hb_075247_010 Hb_000264_110 Hb_000264_110 Hb_003925_020--Hb_000264_110 Hb_004970_140 Hb_004970_140 Hb_003925_020--Hb_004970_140 Hb_002150_040 Hb_002150_040 Hb_003925_020--Hb_002150_040 Hb_000915_240 Hb_000915_240 Hb_003925_020--Hb_000915_240 Hb_005218_020 Hb_005218_020 Hb_003925_020--Hb_005218_020 Hb_003929_270 Hb_003929_270 Hb_003925_020--Hb_003929_270 Hb_000629_120 Hb_000629_120 Hb_009646_040--Hb_000629_120 Hb_000161_060 Hb_000161_060 Hb_009646_040--Hb_000161_060 Hb_000482_020 Hb_000482_020 Hb_009646_040--Hb_000482_020 Hb_017110_010 Hb_017110_010 Hb_009646_040--Hb_017110_010 Hb_001700_030 Hb_001700_030 Hb_009646_040--Hb_001700_030 Hb_092337_010 Hb_092337_010 Hb_009646_040--Hb_092337_010 Hb_002272_280--Hb_009646_040 Hb_011377_050 Hb_011377_050 Hb_002272_280--Hb_011377_050 Hb_000019_070 Hb_000019_070 Hb_002272_280--Hb_000019_070 Hb_000638_170 Hb_000638_170 Hb_002272_280--Hb_000638_170 Hb_002272_280--Hb_000161_060 Hb_000521_130 Hb_000521_130 Hb_002272_280--Hb_000521_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.9886 5.96606 3.63659 64.1674 19.372 8.86816
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.6031 14.1518 40.6679 14.2318 7.73895

CAGE analysis