Hb_150360_020

Information

Type -
Description -
Location Contig150360: 2761-5319
Sequence    

Annotation

kegg
ID cic:CICLE_v10032739mg
description hypothetical protein
nr
ID XP_012065622.1
description PREDICTED: N-alpha-acetyltransferase 11 [Jatropha curcas]
swissprot
ID Q3UX61
description N-alpha-acetyltransferase 11 OS=Mus musculus GN=Naa11 PE=2 SV=1
trembl
ID A0A067GUL8
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028242mg PE=4 SV=1
Gene Ontology
ID GO:0008080
description n-alpha-acetyltransferase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12617: 3610-5291 , PASA_asmbl_12618: 6191-8705
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150360_020 0.0 - - PREDICTED: N-alpha-acetyltransferase 11 [Jatropha curcas]
2 Hb_003226_120 0.1662929755 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000599_100 0.172253026 - - hypothetical protein B456_001G254000 [Gossypium raimondii]
4 Hb_003253_050 0.1756752474 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Jatropha curcas]
5 Hb_084481_010 0.1766773131 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]
6 Hb_033501_010 0.1930153782 - - hypothetical protein JCGZ_21381 [Jatropha curcas]
7 Hb_005873_010 0.194697615 - - cysteine desulfurylase, putative [Ricinus communis]
8 Hb_003038_140 0.1999043077 - - soluble inorganic pyrophosphatase [Hevea brasiliensis]
9 Hb_002675_140 0.2040982047 - - PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Jatropha curcas]
10 Hb_002631_080 0.2057933279 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
11 Hb_000031_260 0.2074671507 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
12 Hb_068804_020 0.2083268204 - - hypothetical protein AMTR_s00046p00231970 [Amborella trichopoda]
13 Hb_001726_110 0.2087032406 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 19 [Jatropha curcas]
14 Hb_001623_160 0.2107616437 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
15 Hb_000227_070 0.210888586 - - PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 [Jatropha curcas]
16 Hb_000120_390 0.2114437371 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
17 Hb_119494_010 0.2115078578 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
18 Hb_000621_020 0.2115621197 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
19 Hb_007943_160 0.2115939051 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
20 Hb_000005_250 0.2145256668 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_150360_020 Hb_150360_020 Hb_003226_120 Hb_003226_120 Hb_150360_020--Hb_003226_120 Hb_000599_100 Hb_000599_100 Hb_150360_020--Hb_000599_100 Hb_003253_050 Hb_003253_050 Hb_150360_020--Hb_003253_050 Hb_084481_010 Hb_084481_010 Hb_150360_020--Hb_084481_010 Hb_033501_010 Hb_033501_010 Hb_150360_020--Hb_033501_010 Hb_005873_010 Hb_005873_010 Hb_150360_020--Hb_005873_010 Hb_008226_070 Hb_008226_070 Hb_003226_120--Hb_008226_070 Hb_028872_110 Hb_028872_110 Hb_003226_120--Hb_028872_110 Hb_004079_080 Hb_004079_080 Hb_003226_120--Hb_004079_080 Hb_000159_120 Hb_000159_120 Hb_003226_120--Hb_000159_120 Hb_003906_170 Hb_003906_170 Hb_003226_120--Hb_003906_170 Hb_007943_160 Hb_007943_160 Hb_003226_120--Hb_007943_160 Hb_000599_100--Hb_003253_050 Hb_000599_100--Hb_033501_010 Hb_062007_010 Hb_062007_010 Hb_000599_100--Hb_062007_010 Hb_000721_040 Hb_000721_040 Hb_000599_100--Hb_000721_040 Hb_000001_190 Hb_000001_190 Hb_000599_100--Hb_000001_190 Hb_001089_040 Hb_001089_040 Hb_000599_100--Hb_001089_040 Hb_119494_010 Hb_119494_010 Hb_003253_050--Hb_119494_010 Hb_002400_410 Hb_002400_410 Hb_003253_050--Hb_002400_410 Hb_002391_210 Hb_002391_210 Hb_003253_050--Hb_002391_210 Hb_003253_050--Hb_033501_010 Hb_119530_010 Hb_119530_010 Hb_003253_050--Hb_119530_010 Hb_002889_030 Hb_002889_030 Hb_003253_050--Hb_002889_030 Hb_002236_040 Hb_002236_040 Hb_084481_010--Hb_002236_040 Hb_084481_010--Hb_033501_010 Hb_000175_540 Hb_000175_540 Hb_084481_010--Hb_000175_540 Hb_084481_010--Hb_002889_030 Hb_000504_070 Hb_000504_070 Hb_084481_010--Hb_000504_070 Hb_109002_020 Hb_109002_020 Hb_084481_010--Hb_109002_020 Hb_033501_010--Hb_002889_030 Hb_033501_010--Hb_119530_010 Hb_000181_050 Hb_000181_050 Hb_033501_010--Hb_000181_050 Hb_033501_010--Hb_003906_170 Hb_002391_270 Hb_002391_270 Hb_033501_010--Hb_002391_270 Hb_001332_040 Hb_001332_040 Hb_005873_010--Hb_001332_040 Hb_001699_200 Hb_001699_200 Hb_005873_010--Hb_001699_200 Hb_105602_010 Hb_105602_010 Hb_005873_010--Hb_105602_010 Hb_000614_170 Hb_000614_170 Hb_005873_010--Hb_000614_170 Hb_000621_020 Hb_000621_020 Hb_005873_010--Hb_000621_020 Hb_001623_160 Hb_001623_160 Hb_005873_010--Hb_001623_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.266732 0.783648 0.286983 1.93728 0.117759 1.36932
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.98741 0.966994 0.654567 4.13824 0.434799

CAGE analysis