Hb_146006_010

Information

Type -
Description -
Location Contig146006: 2743-3598
Sequence    

Annotation

kegg
ID cmo:103498182
description uncharacterized LOC103498182
nr
ID XP_009595194.1
description PREDICTED: uncharacterized protein LOC104091534 [Nicotiana tomentosiformis]
swissprot
ID -
description -
trembl
ID W9R3H7
description Uncharacterized protein OS=Morus notabilis GN=L484_024918 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146006_010 0.0 - - PREDICTED: uncharacterized protein LOC104091534 [Nicotiana tomentosiformis]
2 Hb_000099_210 0.2542184689 - - PREDICTED: uncharacterized protein LOC105645736 [Jatropha curcas]
3 Hb_064885_020 0.2586996406 - - -
4 Hb_000392_100 0.2641439737 transcription factor TF Family: zf-HD transcription factor, putative [Ricinus communis]
5 Hb_053971_010 0.2650009236 - - -
6 Hb_174541_020 0.2774310549 - - PREDICTED: cysteine proteinase inhibitor 6-like [Populus euphratica]
7 Hb_003589_090 0.2804633754 - - PREDICTED: potassium transporter 2 [Jatropha curcas]
8 Hb_001856_020 0.2806836189 transcription factor TF Family: Orphans ethylene receptor, putative [Ricinus communis]
9 Hb_170193_010 0.2831975381 - - JHL25H03.10 [Jatropha curcas]
10 Hb_011218_060 0.2843220426 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
11 Hb_165350_010 0.2891148185 - - unnamed protein product [Triticum aestivum]
12 Hb_000622_310 0.2900016477 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
13 Hb_006452_220 0.2902366047 - - PREDICTED: uncharacterized protein LOC105635043 [Jatropha curcas]
14 Hb_002759_280 0.2908254692 - - PREDICTED: uncharacterized protein LOC105649824 [Jatropha curcas]
15 Hb_067466_010 0.2909807833 - - ankyrin repeat protein [Bruguiera gymnorhiza]
16 Hb_003030_020 0.2915694985 - - PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
17 Hb_030291_020 0.2938220709 - - PREDICTED: protein argonaute 5 isoform X2 [Jatropha curcas]
18 Hb_004129_120 0.2971255707 - - -
19 Hb_048985_010 0.2977964802 - - -
20 Hb_012340_010 0.2987329162 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]

Gene co-expression network

sample Hb_146006_010 Hb_146006_010 Hb_000099_210 Hb_000099_210 Hb_146006_010--Hb_000099_210 Hb_064885_020 Hb_064885_020 Hb_146006_010--Hb_064885_020 Hb_000392_100 Hb_000392_100 Hb_146006_010--Hb_000392_100 Hb_053971_010 Hb_053971_010 Hb_146006_010--Hb_053971_010 Hb_174541_020 Hb_174541_020 Hb_146006_010--Hb_174541_020 Hb_003589_090 Hb_003589_090 Hb_146006_010--Hb_003589_090 Hb_007603_010 Hb_007603_010 Hb_000099_210--Hb_007603_010 Hb_008406_140 Hb_008406_140 Hb_000099_210--Hb_008406_140 Hb_005976_050 Hb_005976_050 Hb_000099_210--Hb_005976_050 Hb_000031_150 Hb_000031_150 Hb_000099_210--Hb_000031_150 Hb_002102_030 Hb_002102_030 Hb_000099_210--Hb_002102_030 Hb_007810_100 Hb_007810_100 Hb_000099_210--Hb_007810_100 Hb_000099_220 Hb_000099_220 Hb_064885_020--Hb_000099_220 Hb_024505_050 Hb_024505_050 Hb_064885_020--Hb_024505_050 Hb_024404_010 Hb_024404_010 Hb_064885_020--Hb_024404_010 Hb_034299_040 Hb_034299_040 Hb_064885_020--Hb_034299_040 Hb_000792_070 Hb_000792_070 Hb_064885_020--Hb_000792_070 Hb_064885_020--Hb_000099_210 Hb_015401_030 Hb_015401_030 Hb_000392_100--Hb_015401_030 Hb_002248_140 Hb_002248_140 Hb_000392_100--Hb_002248_140 Hb_000139_240 Hb_000139_240 Hb_000392_100--Hb_000139_240 Hb_002493_100 Hb_002493_100 Hb_000392_100--Hb_002493_100 Hb_002270_010 Hb_002270_010 Hb_000392_100--Hb_002270_010 Hb_000186_040 Hb_000186_040 Hb_000392_100--Hb_000186_040 Hb_004032_080 Hb_004032_080 Hb_053971_010--Hb_004032_080 Hb_026247_030 Hb_026247_030 Hb_053971_010--Hb_026247_030 Hb_002326_050 Hb_002326_050 Hb_053971_010--Hb_002326_050 Hb_000522_140 Hb_000522_140 Hb_053971_010--Hb_000522_140 Hb_053971_010--Hb_000099_210 Hb_001369_420 Hb_001369_420 Hb_174541_020--Hb_001369_420 Hb_002609_110 Hb_002609_110 Hb_174541_020--Hb_002609_110 Hb_008695_180 Hb_008695_180 Hb_174541_020--Hb_008695_180 Hb_003030_020 Hb_003030_020 Hb_174541_020--Hb_003030_020 Hb_000025_140 Hb_000025_140 Hb_174541_020--Hb_000025_140 Hb_001252_080 Hb_001252_080 Hb_174541_020--Hb_001252_080 Hb_033642_110 Hb_033642_110 Hb_003589_090--Hb_033642_110 Hb_009838_100 Hb_009838_100 Hb_003589_090--Hb_009838_100 Hb_021409_020 Hb_021409_020 Hb_003589_090--Hb_021409_020 Hb_000331_210 Hb_000331_210 Hb_003589_090--Hb_000331_210 Hb_145314_010 Hb_145314_010 Hb_003589_090--Hb_145314_010 Hb_010172_080 Hb_010172_080 Hb_003589_090--Hb_010172_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.115859 0.0276805 0 0.0952924 0.13013 0.087505
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.119382 0.107048 0.0727189 0

CAGE analysis