Hb_137914_010

Information

Type -
Description -
Location Contig137914: 89-877
Sequence    

Annotation

kegg
ID pop:POPTR_0013s02830g
description hypothetical protein
nr
ID KDO64062.1
description hypothetical protein CISIN_1g022501mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067FKT2
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022501mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137914_010 0.0 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
2 Hb_000017_150 0.2131925985 - - hypothetical protein POPTR_0001s09780g [Populus trichocarpa]
3 Hb_001491_060 0.2415954599 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like isoform X1 [Populus euphratica]
4 Hb_002588_020 0.2555276141 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
5 Hb_010398_010 0.2576073187 - - PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15a-like [Malus domestica]
6 Hb_001477_040 0.2630947022 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
7 Hb_001608_020 0.2671333799 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_162280_010 0.2681374304 - - Phosphoprotein phosphatase isoform 2, partial [Theobroma cacao]
9 Hb_030312_010 0.2816716534 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006483_030 0.2837177752 - - Cucumisin precursor, putative [Ricinus communis]
11 Hb_001103_070 0.2873551445 - - Patellin-3, putative [Ricinus communis]
12 Hb_048643_010 0.2884365658 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
13 Hb_000331_280 0.2917696671 - - AMP dependent CoA ligase, putative [Ricinus communis]
14 Hb_001004_120 0.2950778872 - - PREDICTED: receptor-like protein kinase HERK 1 isoform X2 [Jatropha curcas]
15 Hb_000120_970 0.2989353615 - - PREDICTED: probable acyl-activating enzyme 2 isoform X2 [Jatropha curcas]
16 Hb_003581_160 0.3015371562 - - -
17 Hb_115158_010 0.3028253908 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
18 Hb_000649_270 0.3036970578 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
19 Hb_000500_080 0.3038364889 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
20 Hb_151671_010 0.3046019627 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]

Gene co-expression network

sample Hb_137914_010 Hb_137914_010 Hb_000017_150 Hb_000017_150 Hb_137914_010--Hb_000017_150 Hb_001491_060 Hb_001491_060 Hb_137914_010--Hb_001491_060 Hb_002588_020 Hb_002588_020 Hb_137914_010--Hb_002588_020 Hb_010398_010 Hb_010398_010 Hb_137914_010--Hb_010398_010 Hb_001477_040 Hb_001477_040 Hb_137914_010--Hb_001477_040 Hb_001608_020 Hb_001608_020 Hb_137914_010--Hb_001608_020 Hb_011382_050 Hb_011382_050 Hb_000017_150--Hb_011382_050 Hb_000017_150--Hb_010398_010 Hb_003384_070 Hb_003384_070 Hb_000017_150--Hb_003384_070 Hb_000152_460 Hb_000152_460 Hb_000017_150--Hb_000152_460 Hb_001103_040 Hb_001103_040 Hb_000017_150--Hb_001103_040 Hb_001999_190 Hb_001999_190 Hb_001491_060--Hb_001999_190 Hb_002542_120 Hb_002542_120 Hb_001491_060--Hb_002542_120 Hb_001491_060--Hb_002588_020 Hb_003581_160 Hb_003581_160 Hb_001491_060--Hb_003581_160 Hb_001148_020 Hb_001148_020 Hb_001491_060--Hb_001148_020 Hb_002588_020--Hb_003581_160 Hb_000046_230 Hb_000046_230 Hb_002588_020--Hb_000046_230 Hb_011344_100 Hb_011344_100 Hb_002588_020--Hb_011344_100 Hb_001269_280 Hb_001269_280 Hb_002588_020--Hb_001269_280 Hb_010398_010--Hb_001608_020 Hb_000362_090 Hb_000362_090 Hb_010398_010--Hb_000362_090 Hb_001351_040 Hb_001351_040 Hb_010398_010--Hb_001351_040 Hb_048848_010 Hb_048848_010 Hb_010398_010--Hb_048848_010 Hb_000120_970 Hb_000120_970 Hb_010398_010--Hb_000120_970 Hb_000107_560 Hb_000107_560 Hb_010398_010--Hb_000107_560 Hb_001477_040--Hb_001608_020 Hb_001079_030 Hb_001079_030 Hb_001477_040--Hb_001079_030 Hb_000434_010 Hb_000434_010 Hb_001477_040--Hb_000434_010 Hb_001477_040--Hb_010398_010 Hb_000505_110 Hb_000505_110 Hb_001477_040--Hb_000505_110 Hb_000062_030 Hb_000062_030 Hb_001477_040--Hb_000062_030 Hb_001608_020--Hb_000362_090 Hb_004800_240 Hb_004800_240 Hb_001608_020--Hb_004800_240 Hb_001608_020--Hb_048848_010 Hb_004126_080 Hb_004126_080 Hb_001608_020--Hb_004126_080 Hb_009193_110 Hb_009193_110 Hb_001608_020--Hb_009193_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.187704 1.36915 0.0688401 1.41837 1.47798 0.0992863
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0687405 0 0 0.612858 0.108346

CAGE analysis