Hb_011382_050

Information

Type -
Description -
Location Contig11382: 91010-92300
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa025935mg
description hypothetical protein
nr
ID XP_007200832.1
description hypothetical protein PRUPE_ppa025935mg [Prunus persica]
swissprot
ID Q0JEP3
description BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2
trembl
ID M5VMF3
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025935mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04154: 91113-92239
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011382_050 0.0 - - hypothetical protein PRUPE_ppa025935mg [Prunus persica]
2 Hb_003384_070 0.1480858848 - - PREDICTED: methylesterase 17-like [Populus euphratica]
3 Hb_000017_150 0.1665441762 - - hypothetical protein POPTR_0001s09780g [Populus trichocarpa]
4 Hb_101089_010 0.1689809173 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
5 Hb_001103_040 0.1849908597 - - hypothetical protein POPTR_0013s11170g [Populus trichocarpa]
6 Hb_141142_010 0.196672461 - - hypothetical protein JCGZ_21320 [Jatropha curcas]
7 Hb_004611_060 0.2278536734 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
8 Hb_001351_040 0.2322056087 - - PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Jatropha curcas]
9 Hb_000586_060 0.2335735797 - - PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Populus euphratica]
10 Hb_000189_490 0.2356891357 - - Sulfate/thiosulfate import ATP-binding protein cysA [Theobroma cacao]
11 Hb_184705_010 0.2372894231 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
12 Hb_000189_120 0.2373568854 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like isoform X5 [Jatropha curcas]
13 Hb_000844_010 0.2411787132 - - PREDICTED: lysine histidine transporter-like 8 [Jatropha curcas]
14 Hb_140848_010 0.2424082641 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
15 Hb_034337_010 0.2436687826 - - vesicle-associated membrane protein, putative [Ricinus communis]
16 Hb_001584_010 0.2437172243 - - kelch repeat protein, putative [Ricinus communis]
17 Hb_007785_010 0.2467097029 - - glutathione peroxidase, putative [Ricinus communis]
18 Hb_002326_080 0.2472322355 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.6 [Jatropha curcas]
19 Hb_004531_110 0.2472909445 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
20 Hb_001544_080 0.24808479 - - PREDICTED: 66 kDa stress protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_011382_050 Hb_011382_050 Hb_003384_070 Hb_003384_070 Hb_011382_050--Hb_003384_070 Hb_000017_150 Hb_000017_150 Hb_011382_050--Hb_000017_150 Hb_101089_010 Hb_101089_010 Hb_011382_050--Hb_101089_010 Hb_001103_040 Hb_001103_040 Hb_011382_050--Hb_001103_040 Hb_141142_010 Hb_141142_010 Hb_011382_050--Hb_141142_010 Hb_004611_060 Hb_004611_060 Hb_011382_050--Hb_004611_060 Hb_003384_070--Hb_141142_010 Hb_001351_040 Hb_001351_040 Hb_003384_070--Hb_001351_040 Hb_000315_030 Hb_000315_030 Hb_003384_070--Hb_000315_030 Hb_003384_070--Hb_101089_010 Hb_000803_100 Hb_000803_100 Hb_003384_070--Hb_000803_100 Hb_010398_010 Hb_010398_010 Hb_000017_150--Hb_010398_010 Hb_137914_010 Hb_137914_010 Hb_000017_150--Hb_137914_010 Hb_000017_150--Hb_003384_070 Hb_000152_460 Hb_000152_460 Hb_000017_150--Hb_000152_460 Hb_000017_150--Hb_001103_040 Hb_000844_010 Hb_000844_010 Hb_101089_010--Hb_000844_010 Hb_164010_090 Hb_164010_090 Hb_101089_010--Hb_164010_090 Hb_085327_010 Hb_085327_010 Hb_101089_010--Hb_085327_010 Hb_004341_010 Hb_004341_010 Hb_101089_010--Hb_004341_010 Hb_000189_490 Hb_000189_490 Hb_001103_040--Hb_000189_490 Hb_003442_010 Hb_003442_010 Hb_001103_040--Hb_003442_010 Hb_083493_020 Hb_083493_020 Hb_001103_040--Hb_083493_020 Hb_027506_050 Hb_027506_050 Hb_001103_040--Hb_027506_050 Hb_009913_010 Hb_009913_010 Hb_001103_040--Hb_009913_010 Hb_141142_010--Hb_000844_010 Hb_003175_020 Hb_003175_020 Hb_141142_010--Hb_003175_020 Hb_025194_010 Hb_025194_010 Hb_141142_010--Hb_025194_010 Hb_133636_010 Hb_133636_010 Hb_141142_010--Hb_133636_010 Hb_005157_010 Hb_005157_010 Hb_141142_010--Hb_005157_010 Hb_000699_190 Hb_000699_190 Hb_004611_060--Hb_000699_190 Hb_070541_030 Hb_070541_030 Hb_004611_060--Hb_070541_030 Hb_000936_040 Hb_000936_040 Hb_004611_060--Hb_000936_040 Hb_187697_010 Hb_187697_010 Hb_004611_060--Hb_187697_010 Hb_035761_010 Hb_035761_010 Hb_004611_060--Hb_035761_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.446203 2.63297 0.0688419 1.90107 0.509407 0.466933
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.83284 0

CAGE analysis