Hb_001269_280

Information

Type -
Description -
Location Contig1269: 298655-299036
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001269_280 0.0 - - -
2 Hb_005464_010 0.2018867883 - - Thioredoxin H-type, putative [Ricinus communis]
3 Hb_000465_360 0.2094860358 - - hypothetical protein CISIN_1g024854mg [Citrus sinensis]
4 Hb_002368_080 0.2688999592 - - PREDICTED: transcription factor SCREAM2-like isoform X2 [Jatropha curcas]
5 Hb_022425_010 0.2722413139 - - Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis]
6 Hb_001369_530 0.2766081873 - - 21 kDa protein precursor, putative [Ricinus communis]
7 Hb_011344_100 0.2817738672 - - -
8 Hb_128582_010 0.2860469707 - - -
9 Hb_000059_110 0.2876864213 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
10 Hb_004724_010 0.2899375269 - - -
11 Hb_000679_160 0.2909394111 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
12 Hb_002588_020 0.2921547252 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
13 Hb_000658_020 0.2925811836 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Musa acuminata subsp. malaccensis]
14 Hb_001821_030 0.2933276362 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
15 Hb_000270_550 0.2937178138 - - -
16 Hb_112011_010 0.2944793355 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
17 Hb_000146_100 0.294600072 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000521_350 0.2985167933 - - unnamed protein product [Vitis vinifera]
19 Hb_000098_210 0.2988925983 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]
20 Hb_017866_010 0.2992780561 - - kinase family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_001269_280 Hb_001269_280 Hb_005464_010 Hb_005464_010 Hb_001269_280--Hb_005464_010 Hb_000465_360 Hb_000465_360 Hb_001269_280--Hb_000465_360 Hb_002368_080 Hb_002368_080 Hb_001269_280--Hb_002368_080 Hb_022425_010 Hb_022425_010 Hb_001269_280--Hb_022425_010 Hb_001369_530 Hb_001369_530 Hb_001269_280--Hb_001369_530 Hb_011344_100 Hb_011344_100 Hb_001269_280--Hb_011344_100 Hb_005464_010--Hb_001369_530 Hb_000270_550 Hb_000270_550 Hb_005464_010--Hb_000270_550 Hb_004631_030 Hb_004631_030 Hb_005464_010--Hb_004631_030 Hb_000510_210 Hb_000510_210 Hb_005464_010--Hb_000510_210 Hb_000566_170 Hb_000566_170 Hb_005464_010--Hb_000566_170 Hb_002054_090 Hb_002054_090 Hb_005464_010--Hb_002054_090 Hb_017524_010 Hb_017524_010 Hb_000465_360--Hb_017524_010 Hb_004218_230 Hb_004218_230 Hb_000465_360--Hb_004218_230 Hb_009252_110 Hb_009252_110 Hb_000465_360--Hb_009252_110 Hb_000127_070 Hb_000127_070 Hb_000465_360--Hb_000127_070 Hb_005888_040 Hb_005888_040 Hb_000465_360--Hb_005888_040 Hb_000670_080 Hb_000670_080 Hb_002368_080--Hb_000670_080 Hb_000098_210 Hb_000098_210 Hb_002368_080--Hb_000098_210 Hb_000032_330 Hb_000032_330 Hb_002368_080--Hb_000032_330 Hb_128582_010 Hb_128582_010 Hb_002368_080--Hb_128582_010 Hb_006326_020 Hb_006326_020 Hb_002368_080--Hb_006326_020 Hb_001522_050 Hb_001522_050 Hb_002368_080--Hb_001522_050 Hb_001195_440 Hb_001195_440 Hb_022425_010--Hb_001195_440 Hb_176012_010 Hb_176012_010 Hb_022425_010--Hb_176012_010 Hb_118707_010 Hb_118707_010 Hb_022425_010--Hb_118707_010 Hb_002499_020 Hb_002499_020 Hb_022425_010--Hb_002499_020 Hb_000099_020 Hb_000099_020 Hb_022425_010--Hb_000099_020 Hb_001369_530--Hb_000270_550 Hb_001821_030 Hb_001821_030 Hb_001369_530--Hb_001821_030 Hb_012395_150 Hb_012395_150 Hb_001369_530--Hb_012395_150 Hb_012879_010 Hb_012879_010 Hb_001369_530--Hb_012879_010 Hb_179118_010 Hb_179118_010 Hb_001369_530--Hb_179118_010 Hb_183820_010 Hb_183820_010 Hb_001369_530--Hb_183820_010 Hb_001907_130 Hb_001907_130 Hb_011344_100--Hb_001907_130 Hb_170516_010 Hb_170516_010 Hb_011344_100--Hb_170516_010 Hb_115116_010 Hb_115116_010 Hb_011344_100--Hb_115116_010 Hb_065452_010 Hb_065452_010 Hb_011344_100--Hb_065452_010 Hb_033594_090 Hb_033594_090 Hb_011344_100--Hb_033594_090 Hb_011344_100--Hb_005464_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.340297 0 1.17135 0.354673 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.530408 0

CAGE analysis