Hb_022425_010

Information

Type -
Description -
Location Contig22425: 15736-17348
Sequence    

Annotation

kegg
ID rcu:RCOM_1051120
description Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative (EC:2.4.1.207)
nr
ID XP_002514259.1
description Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis]
swissprot
ID Q9SVV2
description Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1
trembl
ID B9RKL5
description Xyloglucan endotransglucosylase/hydrolase OS=Ricinus communis GN=RCOM_1051120 PE=3 SV=1
Gene Ontology
ID GO:0005618
description probable xyloglucan endotransglucosylase hydrolase protein 26

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022425_010 0.0 - - Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis]
2 Hb_001195_440 0.2317231541 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
3 Hb_176012_010 0.254077817 - - conserved hypothetical protein [Ricinus communis]
4 Hb_118707_010 0.2582588308 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
5 Hb_002499_020 0.2682585435 - - hevamine-A precursor, putative [Ricinus communis]
6 Hb_000099_020 0.2698681469 desease resistance Gene Name: ABC_membrane PREDICTED: uncharacterized protein LOC103431057 [Malus domestica]
7 Hb_001269_280 0.2722413139 - - -
8 Hb_005056_030 0.2783196798 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
9 Hb_010571_010 0.2788701243 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
10 Hb_046191_010 0.2804426643 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_106204_010 0.2804560688 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006153_200 0.2810892093 - - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao]
13 Hb_007181_080 0.2889051211 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
14 Hb_012762_070 0.2896205788 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
15 Hb_004122_030 0.2904534811 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 4-like [Populus euphratica]
16 Hb_006120_010 0.2906450682 - - invertase inhibitor [Manihot esculenta]
17 Hb_017491_040 0.2908149251 - - PREDICTED: uncharacterized protein LOC105631348 [Jatropha curcas]
18 Hb_014115_010 0.2914363935 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_000608_080 0.2918215195 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
20 Hb_025254_020 0.2924121015 - - PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]

Gene co-expression network

sample Hb_022425_010 Hb_022425_010 Hb_001195_440 Hb_001195_440 Hb_022425_010--Hb_001195_440 Hb_176012_010 Hb_176012_010 Hb_022425_010--Hb_176012_010 Hb_118707_010 Hb_118707_010 Hb_022425_010--Hb_118707_010 Hb_002499_020 Hb_002499_020 Hb_022425_010--Hb_002499_020 Hb_000099_020 Hb_000099_020 Hb_022425_010--Hb_000099_020 Hb_001269_280 Hb_001269_280 Hb_022425_010--Hb_001269_280 Hb_006153_200 Hb_006153_200 Hb_001195_440--Hb_006153_200 Hb_001901_010 Hb_001901_010 Hb_001195_440--Hb_001901_010 Hb_164162_020 Hb_164162_020 Hb_001195_440--Hb_164162_020 Hb_001971_070 Hb_001971_070 Hb_001195_440--Hb_001971_070 Hb_004544_080 Hb_004544_080 Hb_001195_440--Hb_004544_080 Hb_006538_070 Hb_006538_070 Hb_001195_440--Hb_006538_070 Hb_176012_010--Hb_118707_010 Hb_001862_020 Hb_001862_020 Hb_176012_010--Hb_001862_020 Hb_146361_020 Hb_146361_020 Hb_176012_010--Hb_146361_020 Hb_003407_020 Hb_003407_020 Hb_176012_010--Hb_003407_020 Hb_186115_010 Hb_186115_010 Hb_176012_010--Hb_186115_010 Hb_002903_030 Hb_002903_030 Hb_176012_010--Hb_002903_030 Hb_118707_010--Hb_001862_020 Hb_118707_010--Hb_003407_020 Hb_118707_010--Hb_146361_020 Hb_118707_010--Hb_186115_010 Hb_176232_040 Hb_176232_040 Hb_118707_010--Hb_176232_040 Hb_046191_010 Hb_046191_010 Hb_002499_020--Hb_046191_010 Hb_010571_010 Hb_010571_010 Hb_002499_020--Hb_010571_010 Hb_006120_010 Hb_006120_010 Hb_002499_020--Hb_006120_010 Hb_005056_030 Hb_005056_030 Hb_002499_020--Hb_005056_030 Hb_003469_030 Hb_003469_030 Hb_002499_020--Hb_003469_030 Hb_014115_010 Hb_014115_010 Hb_002499_020--Hb_014115_010 Hb_025254_020 Hb_025254_020 Hb_000099_020--Hb_025254_020 Hb_004122_030 Hb_004122_030 Hb_000099_020--Hb_004122_030 Hb_000099_020--Hb_014115_010 Hb_007181_080 Hb_007181_080 Hb_000099_020--Hb_007181_080 Hb_000099_020--Hb_046191_010 Hb_001493_170 Hb_001493_170 Hb_000099_020--Hb_001493_170 Hb_005464_010 Hb_005464_010 Hb_001269_280--Hb_005464_010 Hb_000465_360 Hb_000465_360 Hb_001269_280--Hb_000465_360 Hb_002368_080 Hb_002368_080 Hb_001269_280--Hb_002368_080 Hb_001369_530 Hb_001369_530 Hb_001269_280--Hb_001369_530 Hb_011344_100 Hb_011344_100 Hb_001269_280--Hb_011344_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0218248 0 0.0447709 0.0261999 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0951033 0

CAGE analysis