Hb_126506_010

Information

Type -
Description -
Location Contig126506: 11-596
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance gene nbs-lrr family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126506_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_162074_010 0.1636814428 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
3 Hb_155642_010 0.1671677428 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
4 Hb_003155_020 0.1825386419 - - Rpp4C3 [Medicago truncatula]
5 Hb_009897_020 0.1860408996 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
6 Hb_123885_010 0.1870143199 - - Disease resistance protein RPS5, putative [Ricinus communis]
7 Hb_001248_110 0.1904744471 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
8 Hb_042553_010 0.1986760568 - - PREDICTED: glutathione S-transferase T1-like [Jatropha curcas]
9 Hb_009897_010 0.1988207372 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
10 Hb_002760_040 0.2007249114 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
11 Hb_049958_010 0.2062860645 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
12 Hb_000483_230 0.2113544987 - - PREDICTED: cationic amino acid transporter 6, chloroplastic-like [Jatropha curcas]
13 Hb_185513_010 0.2118276444 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007259_020 0.2177364894 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Jatropha curcas]
15 Hb_003637_020 0.2194309216 - - conserved hypothetical protein [Ricinus communis]
16 Hb_090459_010 0.2196558323 - - hypothetical protein POPTR_0005s042901g, partial [Populus trichocarpa]
17 Hb_001565_120 0.2229554717 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X1 [Jatropha curcas]
18 Hb_059641_010 0.224093863 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
19 Hb_001544_080 0.2241111706 - - PREDICTED: 66 kDa stress protein-like [Jatropha curcas]
20 Hb_116685_010 0.2265645713 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]

Gene co-expression network

sample Hb_126506_010 Hb_126506_010 Hb_162074_010 Hb_162074_010 Hb_126506_010--Hb_162074_010 Hb_155642_010 Hb_155642_010 Hb_126506_010--Hb_155642_010 Hb_003155_020 Hb_003155_020 Hb_126506_010--Hb_003155_020 Hb_009897_020 Hb_009897_020 Hb_126506_010--Hb_009897_020 Hb_123885_010 Hb_123885_010 Hb_126506_010--Hb_123885_010 Hb_001248_110 Hb_001248_110 Hb_126506_010--Hb_001248_110 Hb_162074_010--Hb_009897_020 Hb_012725_040 Hb_012725_040 Hb_162074_010--Hb_012725_040 Hb_185513_010 Hb_185513_010 Hb_162074_010--Hb_185513_010 Hb_056012_010 Hb_056012_010 Hb_162074_010--Hb_056012_010 Hb_004800_190 Hb_004800_190 Hb_162074_010--Hb_004800_190 Hb_001865_060 Hb_001865_060 Hb_162074_010--Hb_001865_060 Hb_125981_010 Hb_125981_010 Hb_155642_010--Hb_125981_010 Hb_127819_010 Hb_127819_010 Hb_155642_010--Hb_127819_010 Hb_000960_010 Hb_000960_010 Hb_155642_010--Hb_000960_010 Hb_090459_010 Hb_090459_010 Hb_155642_010--Hb_090459_010 Hb_116685_010 Hb_116685_010 Hb_155642_010--Hb_116685_010 Hb_009897_010 Hb_009897_010 Hb_003155_020--Hb_009897_010 Hb_000123_350 Hb_000123_350 Hb_003155_020--Hb_000123_350 Hb_005203_020 Hb_005203_020 Hb_003155_020--Hb_005203_020 Hb_003155_020--Hb_001865_060 Hb_011716_110 Hb_011716_110 Hb_003155_020--Hb_011716_110 Hb_001907_100 Hb_001907_100 Hb_003155_020--Hb_001907_100 Hb_009897_020--Hb_004800_190 Hb_002760_040 Hb_002760_040 Hb_009897_020--Hb_002760_040 Hb_009897_020--Hb_001865_060 Hb_002686_400 Hb_002686_400 Hb_009897_020--Hb_002686_400 Hb_001141_360 Hb_001141_360 Hb_009897_020--Hb_001141_360 Hb_123885_010--Hb_185513_010 Hb_003637_020 Hb_003637_020 Hb_123885_010--Hb_003637_020 Hb_123885_010--Hb_003155_020 Hb_103788_010 Hb_103788_010 Hb_123885_010--Hb_103788_010 Hb_000270_770 Hb_000270_770 Hb_123885_010--Hb_000270_770 Hb_004466_070 Hb_004466_070 Hb_001248_110--Hb_004466_070 Hb_000544_020 Hb_000544_020 Hb_001248_110--Hb_000544_020 Hb_000566_190 Hb_000566_190 Hb_001248_110--Hb_000566_190 Hb_001608_030 Hb_001608_030 Hb_001248_110--Hb_001608_030 Hb_042553_010 Hb_042553_010 Hb_001248_110--Hb_042553_010 Hb_158696_010 Hb_158696_010 Hb_001248_110--Hb_158696_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.35108 36.5847 1.28237 9.29949 3.1273 12.0345
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.288296 0.113235 0.950404 4.11293 1.88634

CAGE analysis