Hb_111985_040

Information

Type transcription factor
Description TF Family: HB
Location Contig111985: 26634-30670
Sequence    

Annotation

kegg
ID rcu:RCOM_1595770
description bel1 homeotic protein, putative
nr
ID XP_012071936.1
description PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
swissprot
ID Q9FWS9
description BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1
trembl
ID A0A067L243
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04485 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bel1-like homeodomain protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111985_040 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
2 Hb_000002_270 0.1073535989 - - hypothetical protein VITISV_043897 [Vitis vinifera]
3 Hb_013749_060 0.1480506594 - - PREDICTED: uncharacterized protein LOC105647762 [Jatropha curcas]
4 Hb_001410_010 0.1512608782 transcription factor TF Family: RWP-RK PREDICTED: protein NLP7-like [Jatropha curcas]
5 Hb_000792_040 0.1565860203 - - PREDICTED: steroid 5-alpha-reductase DET2 [Jatropha curcas]
6 Hb_002122_080 0.1570482205 - - -
7 Hb_001625_010 0.1591672826 - - PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Jatropha curcas]
8 Hb_057079_020 0.1628429948 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002151_100 0.1637579954 - - PREDICTED: uncharacterized protein LOC105637951 [Jatropha curcas]
10 Hb_003398_070 0.1662797774 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
11 Hb_000789_240 0.168459999 - - gamma glutamyl transpeptidases, putative [Ricinus communis]
12 Hb_000866_370 0.1686030585 - - synaptotagmin, putative [Ricinus communis]
13 Hb_065500_010 0.1688563749 - - -
14 Hb_000081_120 0.1690729066 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
15 Hb_007576_200 0.1711482493 - - amino acid transporter, putative [Ricinus communis]
16 Hb_000473_150 0.1716340048 - - PREDICTED: pullulanase 1, chloroplastic [Jatropha curcas]
17 Hb_000302_200 0.1729602155 - - ornithine cyclodeaminase, putative [Ricinus communis]
18 Hb_003506_020 0.1758158056 - - PREDICTED: uncharacterized protein LOC105125881 isoform X1 [Populus euphratica]
19 Hb_000059_130 0.1759502103 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 1 [Jatropha curcas]
20 Hb_000216_020 0.1766267723 - - PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]

Gene co-expression network

sample Hb_111985_040 Hb_111985_040 Hb_000002_270 Hb_000002_270 Hb_111985_040--Hb_000002_270 Hb_013749_060 Hb_013749_060 Hb_111985_040--Hb_013749_060 Hb_001410_010 Hb_001410_010 Hb_111985_040--Hb_001410_010 Hb_000792_040 Hb_000792_040 Hb_111985_040--Hb_000792_040 Hb_002122_080 Hb_002122_080 Hb_111985_040--Hb_002122_080 Hb_001625_010 Hb_001625_010 Hb_111985_040--Hb_001625_010 Hb_000302_200 Hb_000302_200 Hb_000002_270--Hb_000302_200 Hb_000002_270--Hb_000792_040 Hb_000081_120 Hb_000081_120 Hb_000002_270--Hb_000081_120 Hb_003398_070 Hb_003398_070 Hb_000002_270--Hb_003398_070 Hb_007576_200 Hb_007576_200 Hb_000002_270--Hb_007576_200 Hb_057079_020 Hb_057079_020 Hb_013749_060--Hb_057079_020 Hb_000589_220 Hb_000589_220 Hb_013749_060--Hb_000589_220 Hb_000236_110 Hb_000236_110 Hb_013749_060--Hb_000236_110 Hb_013749_060--Hb_001410_010 Hb_002928_120 Hb_002928_120 Hb_013749_060--Hb_002928_120 Hb_002218_070 Hb_002218_070 Hb_001410_010--Hb_002218_070 Hb_001410_010--Hb_057079_020 Hb_011310_200 Hb_011310_200 Hb_001410_010--Hb_011310_200 Hb_001410_010--Hb_000236_110 Hb_002928_180 Hb_002928_180 Hb_001410_010--Hb_002928_180 Hb_036568_010 Hb_036568_010 Hb_001410_010--Hb_036568_010 Hb_000792_040--Hb_000302_200 Hb_185830_070 Hb_185830_070 Hb_000792_040--Hb_185830_070 Hb_004450_070 Hb_004450_070 Hb_000792_040--Hb_004450_070 Hb_000792_040--Hb_007576_200 Hb_006501_160 Hb_006501_160 Hb_000792_040--Hb_006501_160 Hb_008246_020 Hb_008246_020 Hb_000792_040--Hb_008246_020 Hb_003506_020 Hb_003506_020 Hb_002122_080--Hb_003506_020 Hb_002122_080--Hb_007576_200 Hb_000371_060 Hb_000371_060 Hb_002122_080--Hb_000371_060 Hb_002122_080--Hb_000302_200 Hb_000059_130 Hb_000059_130 Hb_002122_080--Hb_000059_130 Hb_000216_020 Hb_000216_020 Hb_002122_080--Hb_000216_020 Hb_000083_130 Hb_000083_130 Hb_001625_010--Hb_000083_130 Hb_002781_010 Hb_002781_010 Hb_001625_010--Hb_002781_010 Hb_001799_190 Hb_001799_190 Hb_001625_010--Hb_001799_190 Hb_169051_010 Hb_169051_010 Hb_001625_010--Hb_169051_010 Hb_001625_010--Hb_000216_020 Hb_001625_010--Hb_003398_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.42669 22.3019 1.06379 11.1125 1.95899 3.36191
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.51292 3.59959 1.95677 15.3899 9.48217

CAGE analysis