Hb_065525_070

Information

Type -
Description -
Location Contig65525: 62046-68395
Sequence    

Annotation

kegg
ID ang:ANI_1_2182064
description An07g09990; heat shock protein
nr
ID BAG57500.1
description unnamed protein product [Homo sapiens]
swissprot
ID P11503
description Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2
trembl
ID B4DFN9
description cDNA FLJ54303, highly similar to Heat shock 70 kDa protein 1 OS=Homo sapiens PE=2 SV=1
Gene Ontology
ID GO:0005524
description heat shock cognate 70 kda protein 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52674: 66595-69622
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065525_070 0.0 - - unnamed protein product [Homo sapiens]
2 Hb_001109_160 0.1055698762 - - DNA binding protein, putative [Ricinus communis]
3 Hb_000976_130 0.1208621601 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
4 Hb_003029_140 0.1238708219 - - PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Jatropha curcas]
5 Hb_020400_020 0.1243488298 - - starch synthase isoform II [Manihot esculenta]
6 Hb_008616_040 0.128431808 - - PREDICTED: RNA-binding protein CP33, chloroplastic [Jatropha curcas]
7 Hb_001250_020 0.1302455385 - - PREDICTED: CRS2-associated factor 2, chloroplastic [Jatropha curcas]
8 Hb_052946_010 0.1307466946 - - PREDICTED: uncharacterized protein LOC105639103 [Jatropha curcas]
9 Hb_021409_190 0.1329742435 - - PREDICTED: luminal-binding protein 5-like [Jatropha curcas]
10 Hb_004109_130 0.1332590818 - - PREDICTED: translation initiation factor IF-2, chloroplastic [Jatropha curcas]
11 Hb_000084_140 0.140400251 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
12 Hb_000906_070 0.1432239327 - - PREDICTED: protein SCAR2-like isoform X1 [Jatropha curcas]
13 Hb_018043_020 0.1436991075 - - PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic [Jatropha curcas]
14 Hb_000997_140 0.1439442924 - - PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Jatropha curcas]
15 Hb_010565_030 0.1482126342 - - hypothetical protein VITISV_006810 [Vitis vinifera]
16 Hb_013399_090 0.1485787299 - - PREDICTED: phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
17 Hb_007933_030 0.1501827864 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
18 Hb_000731_290 0.150484641 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_005542_010 0.151259573 - - Uncharacterized protein TCM_021447 [Theobroma cacao]
20 Hb_003077_130 0.1524715952 - - hypothetical protein JCGZ_22476 [Jatropha curcas]

Gene co-expression network

sample Hb_065525_070 Hb_065525_070 Hb_001109_160 Hb_001109_160 Hb_065525_070--Hb_001109_160 Hb_000976_130 Hb_000976_130 Hb_065525_070--Hb_000976_130 Hb_003029_140 Hb_003029_140 Hb_065525_070--Hb_003029_140 Hb_020400_020 Hb_020400_020 Hb_065525_070--Hb_020400_020 Hb_008616_040 Hb_008616_040 Hb_065525_070--Hb_008616_040 Hb_001250_020 Hb_001250_020 Hb_065525_070--Hb_001250_020 Hb_006916_030 Hb_006916_030 Hb_001109_160--Hb_006916_030 Hb_001109_160--Hb_008616_040 Hb_001109_160--Hb_001250_020 Hb_000066_040 Hb_000066_040 Hb_001109_160--Hb_000066_040 Hb_001109_160--Hb_003029_140 Hb_000906_070 Hb_000906_070 Hb_001109_160--Hb_000906_070 Hb_000976_130--Hb_008616_040 Hb_001053_020 Hb_001053_020 Hb_000976_130--Hb_001053_020 Hb_000005_100 Hb_000005_100 Hb_000976_130--Hb_000005_100 Hb_000976_130--Hb_001250_020 Hb_004242_170 Hb_004242_170 Hb_000976_130--Hb_004242_170 Hb_012799_190 Hb_012799_190 Hb_000976_130--Hb_012799_190 Hb_018043_020 Hb_018043_020 Hb_003029_140--Hb_018043_020 Hb_003029_140--Hb_001250_020 Hb_003029_140--Hb_008616_040 Hb_021409_190 Hb_021409_190 Hb_003029_140--Hb_021409_190 Hb_000997_140 Hb_000997_140 Hb_003029_140--Hb_000997_140 Hb_052946_010 Hb_052946_010 Hb_003029_140--Hb_052946_010 Hb_000538_300 Hb_000538_300 Hb_020400_020--Hb_000538_300 Hb_000084_140 Hb_000084_140 Hb_020400_020--Hb_000084_140 Hb_004109_130 Hb_004109_130 Hb_020400_020--Hb_004109_130 Hb_001969_130 Hb_001969_130 Hb_020400_020--Hb_001969_130 Hb_001579_150 Hb_001579_150 Hb_020400_020--Hb_001579_150 Hb_008616_040--Hb_018043_020 Hb_008616_040--Hb_001250_020 Hb_008616_040--Hb_021409_190 Hb_010984_010 Hb_010984_010 Hb_008616_040--Hb_010984_010 Hb_001250_020--Hb_018043_020 Hb_000762_110 Hb_000762_110 Hb_001250_020--Hb_000762_110 Hb_001250_020--Hb_010984_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
53.3774 354.992 245.184 262.256 133.154 61.1032
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
28.1329 35.5083 71.105 204.135 1043.31

CAGE analysis