Hb_065182_010

Information

Type -
Description -
Location Contig65182: 5360-5836
Sequence    

Annotation

kegg
ID rcu:RCOM_0454760
description hypothetical protein
nr
ID KDP43868.1
description hypothetical protein JCGZ_20878 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9G1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20878 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065182_010 0.0 - - hypothetical protein JCGZ_20878 [Jatropha curcas]
2 Hb_042778_010 0.2503340089 - - -
3 Hb_007336_030 0.2873078132 - - -
4 Hb_004934_080 0.3149458247 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
5 Hb_000802_120 0.374232093 - - -
6 Hb_001387_030 0.3828280645 transcription factor TF Family: ERF hypothetical protein POPTR_0013s13920g [Populus trichocarpa]
7 Hb_000363_440 0.3870031144 - - -
8 Hb_150851_010 0.3933238316 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
9 Hb_000061_280 0.3950497186 - - PREDICTED: pentatricopeptide repeat-containing protein At5g44230 [Jatropha curcas]
10 Hb_008835_010 0.3951850428 - - PREDICTED: uncharacterized protein LOC105851721 [Cicer arietinum]
11 Hb_002234_110 0.3961564179 - - PREDICTED: uncharacterized protein LOC103455142 [Malus domestica]
12 Hb_148122_010 0.4003310823 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
13 Hb_012399_010 0.4026669242 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_007513_010 0.4028856255 - - -
15 Hb_000240_060 0.4063710381 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
16 Hb_001545_190 0.4112069334 - - hypothetical protein VITISV_012031 [Vitis vinifera]
17 Hb_007305_030 0.4143288316 - - serine-threonine protein kinase, putative [Ricinus communis]
18 Hb_030458_010 0.4158074193 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_001799_080 0.4187753272 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_001976_080 0.4208541749 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]

Gene co-expression network

sample Hb_065182_010 Hb_065182_010 Hb_042778_010 Hb_042778_010 Hb_065182_010--Hb_042778_010 Hb_007336_030 Hb_007336_030 Hb_065182_010--Hb_007336_030 Hb_004934_080 Hb_004934_080 Hb_065182_010--Hb_004934_080 Hb_000802_120 Hb_000802_120 Hb_065182_010--Hb_000802_120 Hb_001387_030 Hb_001387_030 Hb_065182_010--Hb_001387_030 Hb_000363_440 Hb_000363_440 Hb_065182_010--Hb_000363_440 Hb_000240_060 Hb_000240_060 Hb_042778_010--Hb_000240_060 Hb_062562_010 Hb_062562_010 Hb_042778_010--Hb_062562_010 Hb_000521_010 Hb_000521_010 Hb_042778_010--Hb_000521_010 Hb_144451_010 Hb_144451_010 Hb_042778_010--Hb_144451_010 Hb_000510_020 Hb_000510_020 Hb_042778_010--Hb_000510_020 Hb_159679_010 Hb_159679_010 Hb_007336_030--Hb_159679_010 Hb_005438_010 Hb_005438_010 Hb_007336_030--Hb_005438_010 Hb_020096_020 Hb_020096_020 Hb_007336_030--Hb_020096_020 Hb_007336_030--Hb_042778_010 Hb_000098_320 Hb_000098_320 Hb_007336_030--Hb_000098_320 Hb_000043_070 Hb_000043_070 Hb_004934_080--Hb_000043_070 Hb_023732_040 Hb_023732_040 Hb_004934_080--Hb_023732_040 Hb_007975_040 Hb_007975_040 Hb_004934_080--Hb_007975_040 Hb_004052_010 Hb_004052_010 Hb_004934_080--Hb_004052_010 Hb_006573_180 Hb_006573_180 Hb_004934_080--Hb_006573_180 Hb_001369_450 Hb_001369_450 Hb_000802_120--Hb_001369_450 Hb_000802_120--Hb_023732_040 Hb_000990_060 Hb_000990_060 Hb_000802_120--Hb_000990_060 Hb_009314_010 Hb_009314_010 Hb_000802_120--Hb_009314_010 Hb_004333_020 Hb_004333_020 Hb_000802_120--Hb_004333_020 Hb_002046_070 Hb_002046_070 Hb_000802_120--Hb_002046_070 Hb_005408_050 Hb_005408_050 Hb_001387_030--Hb_005408_050 Hb_075807_010 Hb_075807_010 Hb_001387_030--Hb_075807_010 Hb_055101_010 Hb_055101_010 Hb_001387_030--Hb_055101_010 Hb_004200_020 Hb_004200_020 Hb_001387_030--Hb_004200_020 Hb_001387_030--Hb_000990_060 Hb_115791_020 Hb_115791_020 Hb_001387_030--Hb_115791_020 Hb_000362_220 Hb_000362_220 Hb_000363_440--Hb_000362_220 Hb_022132_040 Hb_022132_040 Hb_000363_440--Hb_022132_040 Hb_005702_030 Hb_005702_030 Hb_000363_440--Hb_005702_030 Hb_000457_170 Hb_000457_170 Hb_000363_440--Hb_000457_170 Hb_017434_060 Hb_017434_060 Hb_000363_440--Hb_017434_060 Hb_000050_090 Hb_000050_090 Hb_000363_440--Hb_000050_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0618534 0.170927 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.14517 0 0.382498 0 0

CAGE analysis