Hb_007336_030

Information

Type -
Description -
Location Contig7336: 37244-39264
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007336_030 0.0 - - -
2 Hb_159679_010 0.2403070133 - - PREDICTED: uncharacterized protein LOC105786838 [Gossypium raimondii]
3 Hb_005438_010 0.2806033347 - - PREDICTED: uncharacterized protein LOC104902779 [Beta vulgaris subsp. vulgaris]
4 Hb_065182_010 0.2873078132 - - hypothetical protein JCGZ_20878 [Jatropha curcas]
5 Hb_020096_020 0.3392263541 - - -
6 Hb_042778_010 0.3499203594 - - -
7 Hb_000098_320 0.3577805477 - - -
8 Hb_001534_010 0.3581844759 - - Alpha-expansin 3 precursor [Theobroma cacao]
9 Hb_015322_040 0.3595904913 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
10 Hb_012253_010 0.3596132549 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
11 Hb_012366_040 0.366368416 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Gossypium raimondii]
12 Hb_105712_010 0.3664559199 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
13 Hb_150751_010 0.3671874259 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
14 Hb_001243_010 0.3684173783 - - PREDICTED: dirigent protein 4-like [Populus euphratica]
15 Hb_000213_080 0.3692983861 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Vitis vinifera]
16 Hb_007590_060 0.3697798784 - - -
17 Hb_000363_440 0.3701626318 - - -
18 Hb_118419_030 0.3710398617 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 2-like [Jatropha curcas]
19 Hb_001799_080 0.3724374676 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_001638_210 0.3726660043 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007336_030 Hb_007336_030 Hb_159679_010 Hb_159679_010 Hb_007336_030--Hb_159679_010 Hb_005438_010 Hb_005438_010 Hb_007336_030--Hb_005438_010 Hb_065182_010 Hb_065182_010 Hb_007336_030--Hb_065182_010 Hb_020096_020 Hb_020096_020 Hb_007336_030--Hb_020096_020 Hb_042778_010 Hb_042778_010 Hb_007336_030--Hb_042778_010 Hb_000098_320 Hb_000098_320 Hb_007336_030--Hb_000098_320 Hb_159679_010--Hb_005438_010 Hb_159679_010--Hb_020096_020 Hb_015322_040 Hb_015322_040 Hb_159679_010--Hb_015322_040 Hb_001534_010 Hb_001534_010 Hb_159679_010--Hb_001534_010 Hb_159679_010--Hb_000098_320 Hb_012253_010 Hb_012253_010 Hb_005438_010--Hb_012253_010 Hb_011640_030 Hb_011640_030 Hb_005438_010--Hb_011640_030 Hb_005438_010--Hb_000098_320 Hb_005438_010--Hb_001534_010 Hb_065182_010--Hb_042778_010 Hb_004934_080 Hb_004934_080 Hb_065182_010--Hb_004934_080 Hb_000802_120 Hb_000802_120 Hb_065182_010--Hb_000802_120 Hb_001387_030 Hb_001387_030 Hb_065182_010--Hb_001387_030 Hb_000363_440 Hb_000363_440 Hb_065182_010--Hb_000363_440 Hb_007590_060 Hb_007590_060 Hb_020096_020--Hb_007590_060 Hb_008014_070 Hb_008014_070 Hb_020096_020--Hb_008014_070 Hb_001799_080 Hb_001799_080 Hb_020096_020--Hb_001799_080 Hb_001638_210 Hb_001638_210 Hb_020096_020--Hb_001638_210 Hb_027892_010 Hb_027892_010 Hb_020096_020--Hb_027892_010 Hb_000240_060 Hb_000240_060 Hb_042778_010--Hb_000240_060 Hb_062562_010 Hb_062562_010 Hb_042778_010--Hb_062562_010 Hb_000521_010 Hb_000521_010 Hb_042778_010--Hb_000521_010 Hb_144451_010 Hb_144451_010 Hb_042778_010--Hb_144451_010 Hb_000510_020 Hb_000510_020 Hb_042778_010--Hb_000510_020 Hb_000098_320--Hb_001534_010 Hb_000098_320--Hb_015322_040 Hb_001243_010 Hb_001243_010 Hb_000098_320--Hb_001243_010 Hb_000008_180 Hb_000008_180 Hb_000098_320--Hb_000008_180 Hb_000230_320 Hb_000230_320 Hb_000098_320--Hb_000230_320 Hb_000098_320--Hb_011640_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0806847 0.0705821 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.191014 0 0.241761 0.0640199 0

CAGE analysis