Hb_007590_060

Information

Type -
Description -
Location Contig7590: 36259-37826
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007590_060 0.0 - - -
2 Hb_033152_050 0.1962662304 - - hypothetical protein JCGZ_04890 [Jatropha curcas]
3 Hb_001638_210 0.2139627832 - - conserved hypothetical protein [Ricinus communis]
4 Hb_020096_020 0.221029216 - - -
5 Hb_000477_080 0.2300340941 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
6 Hb_006018_030 0.2393763472 - - PREDICTED: uncharacterized protein LOC105108875 isoform X1 [Populus euphratica]
7 Hb_003913_140 0.2413142596 - - PREDICTED: uncharacterized protein LOC105640324 [Jatropha curcas]
8 Hb_173281_010 0.2446902842 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
9 Hb_008643_110 0.2475447343 - - BnaCnng39750D [Brassica napus]
10 Hb_002073_140 0.2480560854 - - -
11 Hb_011360_080 0.2510242502 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
12 Hb_000972_010 0.2522052287 - - PREDICTED: kinesin KP1 [Jatropha curcas]
13 Hb_005671_020 0.252562686 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
14 Hb_048937_030 0.2541054019 - - hypothetical protein RCOM_0231790 [Ricinus communis]
15 Hb_000249_090 0.2549793241 - - PREDICTED: triacylglycerol lipase SDP1 [Jatropha curcas]
16 Hb_001741_040 0.2586719695 rubber biosynthesis Gene Name: REF3 REF-like stress related protein 1 [Hevea brasiliensis]
17 Hb_098315_030 0.261150056 - - PREDICTED: putative glutamine amidotransferase YLR126C [Jatropha curcas]
18 Hb_004324_050 0.2617272793 - - PREDICTED: spermine synthase [Jatropha curcas]
19 Hb_000563_560 0.2632200928 - - PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]
20 Hb_000260_580 0.2651282806 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007590_060 Hb_007590_060 Hb_033152_050 Hb_033152_050 Hb_007590_060--Hb_033152_050 Hb_001638_210 Hb_001638_210 Hb_007590_060--Hb_001638_210 Hb_020096_020 Hb_020096_020 Hb_007590_060--Hb_020096_020 Hb_000477_080 Hb_000477_080 Hb_007590_060--Hb_000477_080 Hb_006018_030 Hb_006018_030 Hb_007590_060--Hb_006018_030 Hb_003913_140 Hb_003913_140 Hb_007590_060--Hb_003913_140 Hb_002836_080 Hb_002836_080 Hb_033152_050--Hb_002836_080 Hb_033152_050--Hb_006018_030 Hb_048937_030 Hb_048937_030 Hb_033152_050--Hb_048937_030 Hb_001504_140 Hb_001504_140 Hb_033152_050--Hb_001504_140 Hb_033152_050--Hb_001638_210 Hb_000249_090 Hb_000249_090 Hb_001638_210--Hb_000249_090 Hb_001638_210--Hb_006018_030 Hb_001741_040 Hb_001741_040 Hb_001638_210--Hb_001741_040 Hb_000120_650 Hb_000120_650 Hb_001638_210--Hb_000120_650 Hb_075449_050 Hb_075449_050 Hb_001638_210--Hb_075449_050 Hb_001638_210--Hb_048937_030 Hb_008014_070 Hb_008014_070 Hb_020096_020--Hb_008014_070 Hb_001799_080 Hb_001799_080 Hb_020096_020--Hb_001799_080 Hb_159679_010 Hb_159679_010 Hb_020096_020--Hb_159679_010 Hb_020096_020--Hb_001638_210 Hb_027892_010 Hb_027892_010 Hb_020096_020--Hb_027892_010 Hb_011360_080 Hb_011360_080 Hb_000477_080--Hb_011360_080 Hb_000141_030 Hb_000141_030 Hb_000477_080--Hb_000141_030 Hb_000368_060 Hb_000368_060 Hb_000477_080--Hb_000368_060 Hb_004429_070 Hb_004429_070 Hb_000477_080--Hb_004429_070 Hb_000562_040 Hb_000562_040 Hb_000477_080--Hb_000562_040 Hb_000103_110 Hb_000103_110 Hb_000477_080--Hb_000103_110 Hb_006018_030--Hb_075449_050 Hb_006018_030--Hb_048937_030 Hb_000107_070 Hb_000107_070 Hb_006018_030--Hb_000107_070 Hb_001391_020 Hb_001391_020 Hb_006018_030--Hb_001391_020 Hb_001671_060 Hb_001671_060 Hb_006018_030--Hb_001671_060 Hb_003913_140--Hb_001741_040 Hb_001902_120 Hb_001902_120 Hb_003913_140--Hb_001902_120 Hb_000545_170 Hb_000545_170 Hb_003913_140--Hb_000545_170 Hb_173281_010 Hb_173281_010 Hb_003913_140--Hb_173281_010 Hb_002045_200 Hb_002045_200 Hb_003913_140--Hb_002045_200 Hb_002450_070 Hb_002450_070 Hb_003913_140--Hb_002450_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.042279 0 0 0.0165438 0.0212041 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.145158 0.0380569 0.21065 0.0305819 0

CAGE analysis