Hb_033152_050

Information

Type -
Description -
Location Contig33152: 45370-45646
Sequence    

Annotation

kegg
ID rcu:RCOM_0773960
description hypothetical protein
nr
ID KDP38247.1
description hypothetical protein JCGZ_04890 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQ70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04890 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 024_K11.ab1: 45202-45666

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033152_050 0.0 - - hypothetical protein JCGZ_04890 [Jatropha curcas]
2 Hb_002836_080 0.1495380247 - - -
3 Hb_006018_030 0.1958774678 - - PREDICTED: uncharacterized protein LOC105108875 isoform X1 [Populus euphratica]
4 Hb_007590_060 0.1962662304 - - -
5 Hb_048937_030 0.1985195969 - - hypothetical protein RCOM_0231790 [Ricinus communis]
6 Hb_001504_140 0.225683813 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
7 Hb_001638_210 0.2305832701 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000249_090 0.2451191133 - - PREDICTED: triacylglycerol lipase SDP1 [Jatropha curcas]
9 Hb_144484_010 0.2553515517 - - calcineurin-like phosphoesterase [Manihot esculenta]
10 Hb_004048_050 0.2557009356 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Citrus sinensis]
11 Hb_000920_150 0.2569988606 - - annexin [Manihot esculenta]
12 Hb_054865_130 0.2573469793 - - acyltransferase, putative [Ricinus communis]
13 Hb_075449_050 0.2582236679 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
14 Hb_000742_270 0.2620154413 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
15 Hb_154443_010 0.2636920775 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
16 Hb_005671_020 0.2653792483 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
17 Hb_011360_080 0.2664710006 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
18 Hb_020096_020 0.2672076432 - - -
19 Hb_000539_030 0.2696510095 rubber biosynthesis Gene Name: Mevalonate diphosphate decarboxylase diphosphomevelonate decarboxylase [Hevea brasiliensis]
20 Hb_005918_030 0.2709132028 - - hypothetical protein JCGZ_24769 [Jatropha curcas]

Gene co-expression network

sample Hb_033152_050 Hb_033152_050 Hb_002836_080 Hb_002836_080 Hb_033152_050--Hb_002836_080 Hb_006018_030 Hb_006018_030 Hb_033152_050--Hb_006018_030 Hb_007590_060 Hb_007590_060 Hb_033152_050--Hb_007590_060 Hb_048937_030 Hb_048937_030 Hb_033152_050--Hb_048937_030 Hb_001504_140 Hb_001504_140 Hb_033152_050--Hb_001504_140 Hb_001638_210 Hb_001638_210 Hb_033152_050--Hb_001638_210 Hb_002836_080--Hb_006018_030 Hb_001391_020 Hb_001391_020 Hb_002836_080--Hb_001391_020 Hb_003207_110 Hb_003207_110 Hb_002836_080--Hb_003207_110 Hb_002836_080--Hb_048937_030 Hb_000920_150 Hb_000920_150 Hb_002836_080--Hb_000920_150 Hb_075449_050 Hb_075449_050 Hb_006018_030--Hb_075449_050 Hb_006018_030--Hb_048937_030 Hb_000107_070 Hb_000107_070 Hb_006018_030--Hb_000107_070 Hb_006018_030--Hb_001391_020 Hb_006018_030--Hb_001638_210 Hb_001671_060 Hb_001671_060 Hb_006018_030--Hb_001671_060 Hb_007590_060--Hb_001638_210 Hb_020096_020 Hb_020096_020 Hb_007590_060--Hb_020096_020 Hb_000477_080 Hb_000477_080 Hb_007590_060--Hb_000477_080 Hb_007590_060--Hb_006018_030 Hb_003913_140 Hb_003913_140 Hb_007590_060--Hb_003913_140 Hb_000742_270 Hb_000742_270 Hb_048937_030--Hb_000742_270 Hb_011671_400 Hb_011671_400 Hb_048937_030--Hb_011671_400 Hb_048937_030--Hb_000107_070 Hb_003020_310 Hb_003020_310 Hb_048937_030--Hb_003020_310 Hb_000175_610 Hb_000175_610 Hb_048937_030--Hb_000175_610 Hb_144484_010 Hb_144484_010 Hb_001504_140--Hb_144484_010 Hb_005671_020 Hb_005671_020 Hb_001504_140--Hb_005671_020 Hb_001635_020 Hb_001635_020 Hb_001504_140--Hb_001635_020 Hb_002473_110 Hb_002473_110 Hb_001504_140--Hb_002473_110 Hb_011472_010 Hb_011472_010 Hb_001504_140--Hb_011472_010 Hb_158092_010 Hb_158092_010 Hb_001504_140--Hb_158092_010 Hb_000249_090 Hb_000249_090 Hb_001638_210--Hb_000249_090 Hb_001741_040 Hb_001741_040 Hb_001638_210--Hb_001741_040 Hb_000120_650 Hb_000120_650 Hb_001638_210--Hb_000120_650 Hb_001638_210--Hb_075449_050 Hb_001638_210--Hb_048937_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.8891 0 0.344352 11.8907 1.25208 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.445 13.0964 51.7158 4.35979 1.45245

CAGE analysis