Hb_075807_010

Information

Type -
Description -
Location Contig75807: 1265-2656
Sequence    

Annotation

kegg
ID rcu:RCOM_0938660
description hypothetical protein
nr
ID XP_012069341.1
description PREDICTED: uncharacterized protein LOC105631775 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LP14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10039 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075807_010 0.0 - - PREDICTED: uncharacterized protein LOC105631775 [Jatropha curcas]
2 Hb_001387_030 0.2001803592 transcription factor TF Family: ERF hypothetical protein POPTR_0013s13920g [Populus trichocarpa]
3 Hb_020301_030 0.2119593952 - - calmodulin binding protein, putative [Ricinus communis]
4 Hb_025557_030 0.2166707818 - - PREDICTED: pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Jatropha curcas]
5 Hb_027393_030 0.2203351704 - - PREDICTED: uncharacterized protein At5g39865 [Jatropha curcas]
6 Hb_002007_190 0.2234258722 - - hypothetical protein RCOM_1432220 [Ricinus communis]
7 Hb_001189_050 0.2238896861 - - PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Jatropha curcas]
8 Hb_004690_040 0.2240950403 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71420 [Jatropha curcas]
9 Hb_022250_090 0.2305599818 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Jatropha curcas]
10 Hb_000367_260 0.2306708355 - - PREDICTED: uncharacterized protein LOC105640585 [Jatropha curcas]
11 Hb_001373_180 0.2313600992 - - PREDICTED: uncharacterized protein LOC105628780 isoform X2 [Jatropha curcas]
12 Hb_055101_010 0.2315782742 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
13 Hb_000206_240 0.2315860936 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004200_020 0.234253814 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
15 Hb_002045_180 0.2343500669 - - PREDICTED: uncharacterized protein LOC105649915 [Jatropha curcas]
16 Hb_000239_020 0.2372738369 - - PREDICTED: F-box/kelch-repeat protein At5g43190 [Jatropha curcas]
17 Hb_115791_020 0.2380892183 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
18 Hb_004375_150 0.2397273235 - - PREDICTED: uncharacterized protein LOC105642574 [Jatropha curcas]
19 Hb_001314_020 0.2397495055 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Jatropha curcas]
20 Hb_000189_140 0.2402429153 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_075807_010 Hb_075807_010 Hb_001387_030 Hb_001387_030 Hb_075807_010--Hb_001387_030 Hb_020301_030 Hb_020301_030 Hb_075807_010--Hb_020301_030 Hb_025557_030 Hb_025557_030 Hb_075807_010--Hb_025557_030 Hb_027393_030 Hb_027393_030 Hb_075807_010--Hb_027393_030 Hb_002007_190 Hb_002007_190 Hb_075807_010--Hb_002007_190 Hb_001189_050 Hb_001189_050 Hb_075807_010--Hb_001189_050 Hb_005408_050 Hb_005408_050 Hb_001387_030--Hb_005408_050 Hb_055101_010 Hb_055101_010 Hb_001387_030--Hb_055101_010 Hb_004200_020 Hb_004200_020 Hb_001387_030--Hb_004200_020 Hb_000990_060 Hb_000990_060 Hb_001387_030--Hb_000990_060 Hb_115791_020 Hb_115791_020 Hb_001387_030--Hb_115791_020 Hb_000389_050 Hb_000389_050 Hb_020301_030--Hb_000389_050 Hb_009615_120 Hb_009615_120 Hb_020301_030--Hb_009615_120 Hb_002609_040 Hb_002609_040 Hb_020301_030--Hb_002609_040 Hb_001946_330 Hb_001946_330 Hb_020301_030--Hb_001946_330 Hb_036988_010 Hb_036988_010 Hb_020301_030--Hb_036988_010 Hb_000318_330 Hb_000318_330 Hb_025557_030--Hb_000318_330 Hb_004607_030 Hb_004607_030 Hb_025557_030--Hb_004607_030 Hb_027472_170 Hb_027472_170 Hb_025557_030--Hb_027472_170 Hb_000019_130 Hb_000019_130 Hb_025557_030--Hb_000019_130 Hb_004375_150 Hb_004375_150 Hb_025557_030--Hb_004375_150 Hb_011030_020 Hb_011030_020 Hb_025557_030--Hb_011030_020 Hb_005545_100 Hb_005545_100 Hb_027393_030--Hb_005545_100 Hb_000367_260 Hb_000367_260 Hb_027393_030--Hb_000367_260 Hb_027393_030--Hb_004375_150 Hb_005542_060 Hb_005542_060 Hb_027393_030--Hb_005542_060 Hb_005228_070 Hb_005228_070 Hb_027393_030--Hb_005228_070 Hb_000239_020 Hb_000239_020 Hb_027393_030--Hb_000239_020 Hb_007645_080 Hb_007645_080 Hb_002007_190--Hb_007645_080 Hb_001364_030 Hb_001364_030 Hb_002007_190--Hb_001364_030 Hb_000260_310 Hb_000260_310 Hb_002007_190--Hb_000260_310 Hb_001373_180 Hb_001373_180 Hb_002007_190--Hb_001373_180 Hb_000349_290 Hb_000349_290 Hb_002007_190--Hb_000349_290 Hb_000574_350 Hb_000574_350 Hb_002007_190--Hb_000574_350 Hb_001189_050--Hb_011030_020 Hb_000019_060 Hb_000019_060 Hb_001189_050--Hb_000019_060 Hb_001493_180 Hb_001493_180 Hb_001189_050--Hb_001493_180 Hb_010608_050 Hb_010608_050 Hb_001189_050--Hb_010608_050 Hb_001189_050--Hb_025557_030 Hb_001357_010 Hb_001357_010 Hb_001189_050--Hb_001357_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.186333 0.53447 0.0115915 0.170291 0 0.213713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.248337 0.362813 0.887372 0.111581 0.290496

CAGE analysis