Hb_036988_010

Information

Type -
Description -
Location Contig36988: 176-652
Sequence    

Annotation

kegg
ID cit:102625233
description protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
nr
ID KDP24756.1
description hypothetical protein JCGZ_25496 [Jatropha curcas]
swissprot
ID O23530
description Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
trembl
ID A0A067JLB3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25496 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036988_010 0.0 - - hypothetical protein JCGZ_25496 [Jatropha curcas]
2 Hb_000684_440 0.2080457455 - - hypothetical protein CICLE_v100111082mg, partial [Citrus clementina]
3 Hb_001294_010 0.223254315 - - PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Jatropha curcas]
4 Hb_000786_030 0.2277268774 - - PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
5 Hb_002422_070 0.2313067108 - - PREDICTED: putative protein TPRXL [Malus domestica]
6 Hb_000479_140 0.2359553974 - - TPA: hypothetical protein ZEAMMB73_881803, partial [Zea mays]
7 Hb_002307_170 0.2400991447 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Jatropha curcas]
8 Hb_000471_110 0.2413794415 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Jatropha curcas]
9 Hb_020301_030 0.2430606283 - - calmodulin binding protein, putative [Ricinus communis]
10 Hb_004020_020 0.2449430523 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Jatropha curcas]
11 Hb_011386_020 0.2449847094 - - unnamed protein product [Vitis vinifera]
12 Hb_000020_120 0.2456176254 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like [Jatropha curcas]
13 Hb_002748_030 0.2462641458 - - nucleotide binding protein, putative [Ricinus communis]
14 Hb_024991_010 0.2464552243 - - hypothetical protein B456_007G217100 [Gossypium raimondii]
15 Hb_003370_050 0.2485709154 - - PREDICTED: uncharacterized protein LOC103697550 [Phoenix dactylifera]
16 Hb_001014_230 0.250322239 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Jatropha curcas]
17 Hb_000154_010 0.2532512706 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_064441_010 0.2546083323 - - PREDICTED: MACPF domain-containing protein CAD1-like isoform X1 [Jatropha curcas]
19 Hb_001817_020 0.2554676691 - - PREDICTED: F-box/kelch-repeat protein OR23 [Jatropha curcas]
20 Hb_001357_010 0.255667978 - - -

Gene co-expression network

sample Hb_036988_010 Hb_036988_010 Hb_000684_440 Hb_000684_440 Hb_036988_010--Hb_000684_440 Hb_001294_010 Hb_001294_010 Hb_036988_010--Hb_001294_010 Hb_000786_030 Hb_000786_030 Hb_036988_010--Hb_000786_030 Hb_002422_070 Hb_002422_070 Hb_036988_010--Hb_002422_070 Hb_000479_140 Hb_000479_140 Hb_036988_010--Hb_000479_140 Hb_002307_170 Hb_002307_170 Hb_036988_010--Hb_002307_170 Hb_001010_070 Hb_001010_070 Hb_000684_440--Hb_001010_070 Hb_002304_070 Hb_002304_070 Hb_000684_440--Hb_002304_070 Hb_012627_020 Hb_012627_020 Hb_000684_440--Hb_012627_020 Hb_000346_040 Hb_000346_040 Hb_000684_440--Hb_000346_040 Hb_020665_010 Hb_020665_010 Hb_000684_440--Hb_020665_010 Hb_004020_020 Hb_004020_020 Hb_000684_440--Hb_004020_020 Hb_092107_010 Hb_092107_010 Hb_001294_010--Hb_092107_010 Hb_001014_230 Hb_001014_230 Hb_001294_010--Hb_001014_230 Hb_001357_010 Hb_001357_010 Hb_001294_010--Hb_001357_010 Hb_003294_100 Hb_003294_100 Hb_001294_010--Hb_003294_100 Hb_001294_010--Hb_002307_170 Hb_004056_030 Hb_004056_030 Hb_001294_010--Hb_004056_030 Hb_000672_020 Hb_000672_020 Hb_000786_030--Hb_000672_020 Hb_003030_030 Hb_003030_030 Hb_000786_030--Hb_003030_030 Hb_000786_030--Hb_002422_070 Hb_027760_020 Hb_027760_020 Hb_000786_030--Hb_027760_020 Hb_000656_090 Hb_000656_090 Hb_000786_030--Hb_000656_090 Hb_003352_040 Hb_003352_040 Hb_000786_030--Hb_003352_040 Hb_006277_110 Hb_006277_110 Hb_002422_070--Hb_006277_110 Hb_012794_010 Hb_012794_010 Hb_002422_070--Hb_012794_010 Hb_000300_290 Hb_000300_290 Hb_002422_070--Hb_000300_290 Hb_005092_060 Hb_005092_060 Hb_002422_070--Hb_005092_060 Hb_000260_810 Hb_000260_810 Hb_002422_070--Hb_000260_810 Hb_002422_070--Hb_000346_040 Hb_000471_110 Hb_000471_110 Hb_000479_140--Hb_000471_110 Hb_000406_130 Hb_000406_130 Hb_000479_140--Hb_000406_130 Hb_000020_120 Hb_000020_120 Hb_000479_140--Hb_000020_120 Hb_001242_130 Hb_001242_130 Hb_000479_140--Hb_001242_130 Hb_010344_050 Hb_010344_050 Hb_000479_140--Hb_010344_050 Hb_000497_300 Hb_000497_300 Hb_000479_140--Hb_000497_300 Hb_013607_040 Hb_013607_040 Hb_002307_170--Hb_013607_040 Hb_004846_070 Hb_004846_070 Hb_002307_170--Hb_004846_070 Hb_011534_030 Hb_011534_030 Hb_002307_170--Hb_011534_030 Hb_002307_170--Hb_000479_140 Hb_002307_170--Hb_001014_230 Hb_002307_170--Hb_000471_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.74224 0.585857 0 1.20223 0 1.93619
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.30653 0.912301 3.05998 1.19078 2.53038

CAGE analysis