Hb_021596_010

Information

Type -
Description -
Location Contig21596: 12066-14984
Sequence    

Annotation

kegg
ID cic:CICLE_v10004243mg
description hypothetical protein
nr
ID XP_012088500.1
description PREDICTED: uncharacterized protein LOC105647118 [Jatropha curcas]
swissprot
ID Q24133
description DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3
trembl
ID A0A067JWR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25382 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22341: 10679-15336
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021596_010 0.0 - - PREDICTED: uncharacterized protein LOC105647118 [Jatropha curcas]
2 Hb_003047_020 0.0510105041 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
3 Hb_000367_020 0.0655038456 - - PREDICTED: uncharacterized protein LOC105640608 [Jatropha curcas]
4 Hb_000003_410 0.0676377327 - - PREDICTED: intron-binding protein aquarius [Jatropha curcas]
5 Hb_000958_050 0.0743353575 - - hypothetical protein JCGZ_16781 [Jatropha curcas]
6 Hb_005408_030 0.0758866754 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
7 Hb_008686_020 0.0774489729 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
8 Hb_012490_010 0.0779102377 - - PREDICTED: uncharacterized protein LOC105637916 isoform X2 [Jatropha curcas]
9 Hb_000009_410 0.0785014391 transcription factor TF Family: SET hypothetical protein POPTR_0007s12130g [Populus trichocarpa]
10 Hb_004551_020 0.0812402241 - - PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha curcas]
11 Hb_002521_020 0.0830766656 - - PREDICTED: pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like isoform X2 [Jatropha curcas]
12 Hb_004204_010 0.0834829289 - - PREDICTED: uncharacterized protein LOC105640608 [Jatropha curcas]
13 Hb_000928_090 0.0848318228 - - PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Jatropha curcas]
14 Hb_000645_130 0.085249767 - - PREDICTED: bromodomain and WD repeat-containing protein 3 [Jatropha curcas]
15 Hb_000665_230 0.0861249671 - - PREDICTED: uncharacterized protein LOC105637615 [Jatropha curcas]
16 Hb_002928_190 0.0862983393 transcription factor TF Family: RWP-RK PREDICTED: protein NLP4 [Jatropha curcas]
17 Hb_004696_070 0.087087151 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
18 Hb_001951_170 0.0871613645 - - PREDICTED: uncharacterized protein LOC105649755 [Jatropha curcas]
19 Hb_004659_090 0.0875107013 - - PREDICTED: uncharacterized protein LOC105629935 [Jatropha curcas]
20 Hb_001133_030 0.087515808 - - PREDICTED: MAG2-interacting protein 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_021596_010 Hb_021596_010 Hb_003047_020 Hb_003047_020 Hb_021596_010--Hb_003047_020 Hb_000367_020 Hb_000367_020 Hb_021596_010--Hb_000367_020 Hb_000003_410 Hb_000003_410 Hb_021596_010--Hb_000003_410 Hb_000958_050 Hb_000958_050 Hb_021596_010--Hb_000958_050 Hb_005408_030 Hb_005408_030 Hb_021596_010--Hb_005408_030 Hb_008686_020 Hb_008686_020 Hb_021596_010--Hb_008686_020 Hb_003047_020--Hb_000003_410 Hb_020805_150 Hb_020805_150 Hb_003047_020--Hb_020805_150 Hb_000703_200 Hb_000703_200 Hb_003047_020--Hb_000703_200 Hb_012490_010 Hb_012490_010 Hb_003047_020--Hb_012490_010 Hb_009302_030 Hb_009302_030 Hb_003047_020--Hb_009302_030 Hb_001951_100 Hb_001951_100 Hb_000367_020--Hb_001951_100 Hb_000367_020--Hb_008686_020 Hb_005649_080 Hb_005649_080 Hb_000367_020--Hb_005649_080 Hb_000154_130 Hb_000154_130 Hb_000367_020--Hb_000154_130 Hb_001054_120 Hb_001054_120 Hb_000367_020--Hb_001054_120 Hb_000003_410--Hb_000958_050 Hb_001133_030 Hb_001133_030 Hb_000003_410--Hb_001133_030 Hb_000934_210 Hb_000934_210 Hb_000003_410--Hb_000934_210 Hb_003216_090 Hb_003216_090 Hb_000003_410--Hb_003216_090 Hb_000009_410 Hb_000009_410 Hb_000003_410--Hb_000009_410 Hb_005701_050 Hb_005701_050 Hb_000958_050--Hb_005701_050 Hb_000958_050--Hb_000934_210 Hb_000645_130 Hb_000645_130 Hb_000958_050--Hb_000645_130 Hb_002007_110 Hb_002007_110 Hb_000958_050--Hb_002007_110 Hb_012055_110 Hb_012055_110 Hb_000958_050--Hb_012055_110 Hb_005408_030--Hb_000009_410 Hb_001648_020 Hb_001648_020 Hb_005408_030--Hb_001648_020 Hb_001951_170 Hb_001951_170 Hb_005408_030--Hb_001951_170 Hb_005186_040 Hb_005186_040 Hb_005408_030--Hb_005186_040 Hb_011021_050 Hb_011021_050 Hb_005408_030--Hb_011021_050 Hb_005408_030--Hb_000934_210 Hb_002918_320 Hb_002918_320 Hb_008686_020--Hb_002918_320 Hb_008686_020--Hb_012490_010 Hb_008686_020--Hb_001951_100 Hb_002928_190 Hb_002928_190 Hb_008686_020--Hb_002928_190 Hb_004551_020 Hb_004551_020 Hb_008686_020--Hb_004551_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.48794 17.7115 7.09267 7.26071 6.43441 5.16158
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.90003 3.02318 6.34263 8.60959 13.9222

CAGE analysis