Hb_019520_010

Information

Type -
Description -
Location Contig19520: 29895-32913
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021229mg
description hypothetical protein
nr
ID XP_007213082.1
description hypothetical protein PRUPE_ppa021229mg [Prunus persica]
swissprot
ID Q99315
description Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3
trembl
ID M5WLY8
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019520_010 0.0 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
2 Hb_001623_520 0.3134067643 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
3 Hb_153461_010 0.3390772211 - - PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
4 Hb_000903_030 0.3455996435 - - -
5 Hb_003972_020 0.3640850487 - - conserved hypothetical protein [Ricinus communis]
6 Hb_084391_010 0.3714747576 - - xylulose kinase, putative [Ricinus communis]
7 Hb_005914_240 0.3857543777 - - PREDICTED: oxidation resistance protein 1 [Jatropha curcas]
8 Hb_001623_320 0.3882230311 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X1 [Populus euphratica]
9 Hb_015609_020 0.3954647076 - - PREDICTED: uncharacterized protein LOC105642775 [Jatropha curcas]
10 Hb_000061_200 0.4014153562 - - nitrate transporter, putative [Ricinus communis]
11 Hb_075136_010 0.4072290027 - - Protein SSU72, putative [Ricinus communis]
12 Hb_173866_010 0.4099265754 - - -
13 Hb_007012_070 0.4108322853 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
14 Hb_000544_140 0.4111853841 - - PREDICTED: uncharacterized protein LOC101245866 [Solanum lycopersicum]
15 Hb_000413_160 0.4154794256 - - PREDICTED: uncharacterized protein LOC105649406 isoform X2 [Jatropha curcas]
16 Hb_014050_010 0.4170974834 - - PREDICTED: histone H3.3-like, partial [Phoenix dactylifera]
17 Hb_007188_050 0.4175837568 - - -
18 Hb_007044_150 0.419743151 - - PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Jatropha curcas]
19 Hb_004147_060 0.4212069217 - - PREDICTED: uncharacterized protein LOC105630996 [Jatropha curcas]
20 Hb_004079_020 0.4218426299 - - hypothetical protein glysoja_031528 [Glycine soja]

Gene co-expression network

sample Hb_019520_010 Hb_019520_010 Hb_001623_520 Hb_001623_520 Hb_019520_010--Hb_001623_520 Hb_153461_010 Hb_153461_010 Hb_019520_010--Hb_153461_010 Hb_000903_030 Hb_000903_030 Hb_019520_010--Hb_000903_030 Hb_003972_020 Hb_003972_020 Hb_019520_010--Hb_003972_020 Hb_084391_010 Hb_084391_010 Hb_019520_010--Hb_084391_010 Hb_005914_240 Hb_005914_240 Hb_019520_010--Hb_005914_240 Hb_001623_520--Hb_084391_010 Hb_004699_020 Hb_004699_020 Hb_001623_520--Hb_004699_020 Hb_000951_040 Hb_000951_040 Hb_001623_520--Hb_000951_040 Hb_001623_520--Hb_003972_020 Hb_011360_020 Hb_011360_020 Hb_001623_520--Hb_011360_020 Hb_054936_010 Hb_054936_010 Hb_153461_010--Hb_054936_010 Hb_153461_010--Hb_000903_030 Hb_124141_010 Hb_124141_010 Hb_153461_010--Hb_124141_010 Hb_000684_480 Hb_000684_480 Hb_153461_010--Hb_000684_480 Hb_079993_010 Hb_079993_010 Hb_153461_010--Hb_079993_010 Hb_000086_190 Hb_000086_190 Hb_153461_010--Hb_000086_190 Hb_007188_050 Hb_007188_050 Hb_000903_030--Hb_007188_050 Hb_032531_050 Hb_032531_050 Hb_000903_030--Hb_032531_050 Hb_002988_020 Hb_002988_020 Hb_000903_030--Hb_002988_020 Hb_079978_010 Hb_079978_010 Hb_000903_030--Hb_079978_010 Hb_000903_030--Hb_000684_480 Hb_003972_020--Hb_084391_010 Hb_023813_010 Hb_023813_010 Hb_003972_020--Hb_023813_010 Hb_009722_020 Hb_009722_020 Hb_003972_020--Hb_009722_020 Hb_000092_210 Hb_000092_210 Hb_003972_020--Hb_000092_210 Hb_007426_240 Hb_007426_240 Hb_003972_020--Hb_007426_240 Hb_008202_030 Hb_008202_030 Hb_003972_020--Hb_008202_030 Hb_084391_010--Hb_011360_020 Hb_084391_010--Hb_004699_020 Hb_000103_050 Hb_000103_050 Hb_084391_010--Hb_000103_050 Hb_008516_020 Hb_008516_020 Hb_084391_010--Hb_008516_020 Hb_004079_020 Hb_004079_020 Hb_005914_240--Hb_004079_020 Hb_001021_060 Hb_001021_060 Hb_005914_240--Hb_001021_060 Hb_006344_010 Hb_006344_010 Hb_005914_240--Hb_006344_010 Hb_000544_140 Hb_000544_140 Hb_005914_240--Hb_000544_140 Hb_140572_010 Hb_140572_010 Hb_005914_240--Hb_140572_010 Hb_063912_010 Hb_063912_010 Hb_005914_240--Hb_063912_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0110569 0.00531672 0 0.0442118
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0126559 0.0241683 0 0

CAGE analysis