Hb_023813_010

Information

Type -
Description -
Location Contig23813: 2573-4590
Sequence    

Annotation

kegg
ID pda:103695614
description uncharacterized LOC103695614
nr
ID XP_011078464.1
description PREDICTED: uncharacterized protein LOC105162193 [Sesamum indicum]
swissprot
ID Q9XEC1
description Probable transposase-like protein At4g04430 OS=Arabidopsis thaliana GN=At4g04430 PE=3 SV=1
trembl
ID I3SWI3
description Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023813_010 0.0 - - PREDICTED: uncharacterized protein LOC105162193 [Sesamum indicum]
2 Hb_009722_020 0.0147204837 - - -
3 Hb_000092_210 0.0315994027 - - -
4 Hb_007426_240 0.0749126792 - - -
5 Hb_008202_030 0.0966284553 - - hypothetical protein B456_002G115600 [Gossypium raimondii]
6 Hb_000529_120 0.0968897285 - - PREDICTED: uncharacterized protein LOC105641745 [Jatropha curcas]
7 Hb_000800_100 0.1112134443 - - hypothetical protein JCGZ_01543 [Jatropha curcas]
8 Hb_000173_300 0.1662150874 - - PREDICTED: uncharacterized protein LOC105631894 [Jatropha curcas]
9 Hb_026113_020 0.1768861593 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_006684_020 0.1800067974 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
11 Hb_000976_220 0.1908043713 - - PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Jatropha curcas]
12 Hb_127120_010 0.1908570995 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
13 Hb_007407_030 0.191051935 - - hypothetical protein JCGZ_23510 [Jatropha curcas]
14 Hb_000573_030 0.2193405105 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
15 Hb_003621_010 0.2649147048 - - -
16 Hb_007044_150 0.2856035598 - - PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Jatropha curcas]
17 Hb_069868_010 0.2905002417 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
18 Hb_000252_140 0.2915032605 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_003972_020 0.2989202507 - - conserved hypothetical protein [Ricinus communis]
20 Hb_163413_010 0.3253026073 - - PREDICTED: uncharacterized protein LOC102604542 [Solanum tuberosum]

Gene co-expression network

sample Hb_023813_010 Hb_023813_010 Hb_009722_020 Hb_009722_020 Hb_023813_010--Hb_009722_020 Hb_000092_210 Hb_000092_210 Hb_023813_010--Hb_000092_210 Hb_007426_240 Hb_007426_240 Hb_023813_010--Hb_007426_240 Hb_008202_030 Hb_008202_030 Hb_023813_010--Hb_008202_030 Hb_000529_120 Hb_000529_120 Hb_023813_010--Hb_000529_120 Hb_000800_100 Hb_000800_100 Hb_023813_010--Hb_000800_100 Hb_009722_020--Hb_000092_210 Hb_009722_020--Hb_008202_030 Hb_009722_020--Hb_007426_240 Hb_009722_020--Hb_000800_100 Hb_009722_020--Hb_000529_120 Hb_000092_210--Hb_007426_240 Hb_000092_210--Hb_000529_120 Hb_000092_210--Hb_008202_030 Hb_000173_300 Hb_000173_300 Hb_000092_210--Hb_000173_300 Hb_007426_240--Hb_000529_120 Hb_007426_240--Hb_000173_300 Hb_026113_020 Hb_026113_020 Hb_007426_240--Hb_026113_020 Hb_008202_030--Hb_000800_100 Hb_003621_010 Hb_003621_010 Hb_008202_030--Hb_003621_010 Hb_008202_030--Hb_007426_240 Hb_000529_120--Hb_000173_300 Hb_000529_120--Hb_026113_020 Hb_006684_020 Hb_006684_020 Hb_000529_120--Hb_006684_020 Hb_000976_220 Hb_000976_220 Hb_000529_120--Hb_000976_220 Hb_000800_100--Hb_000092_210 Hb_000800_100--Hb_003621_010 Hb_000800_100--Hb_007426_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0809026
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0660964 0 0 0

CAGE analysis