Hb_000800_100

Information

Type -
Description -
Location Contig800: 217016-217372
Sequence    

Annotation

kegg
ID pop:POPTR_0010s23920g
description POPTRDRAFT_833890; hypothetical protein
nr
ID KDP45043.1
description hypothetical protein JCGZ_01543 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01543 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000800_100 0.0 - - hypothetical protein JCGZ_01543 [Jatropha curcas]
2 Hb_008202_030 0.0146475363 - - hypothetical protein B456_002G115600 [Gossypium raimondii]
3 Hb_009722_020 0.0965522412 - - -
4 Hb_023813_010 0.1112134443 - - PREDICTED: uncharacterized protein LOC105162193 [Sesamum indicum]
5 Hb_000092_210 0.1426296485 - - -
6 Hb_003621_010 0.1558531875 - - -
7 Hb_007426_240 0.1855719369 - - -
8 Hb_000529_120 0.2073089203 - - PREDICTED: uncharacterized protein LOC105641745 [Jatropha curcas]
9 Hb_069868_010 0.2296776216 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
10 Hb_000573_030 0.2380794697 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
11 Hb_007044_150 0.240918218 - - PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Jatropha curcas]
12 Hb_000173_300 0.2756487619 - - PREDICTED: uncharacterized protein LOC105631894 [Jatropha curcas]
13 Hb_026113_020 0.2861367987 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_006684_020 0.2892022903 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_000246_140 0.2988606187 - - xylulose kinase, putative [Ricinus communis]
16 Hb_000976_220 0.2998033396 - - PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Jatropha curcas]
17 Hb_127120_010 0.2998550862 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
18 Hb_007407_030 0.3000462929 - - hypothetical protein JCGZ_23510 [Jatropha curcas]
19 Hb_003972_020 0.3151569596 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000252_140 0.3171906755 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_000800_100 Hb_000800_100 Hb_008202_030 Hb_008202_030 Hb_000800_100--Hb_008202_030 Hb_009722_020 Hb_009722_020 Hb_000800_100--Hb_009722_020 Hb_023813_010 Hb_023813_010 Hb_000800_100--Hb_023813_010 Hb_000092_210 Hb_000092_210 Hb_000800_100--Hb_000092_210 Hb_003621_010 Hb_003621_010 Hb_000800_100--Hb_003621_010 Hb_007426_240 Hb_007426_240 Hb_000800_100--Hb_007426_240 Hb_008202_030--Hb_009722_020 Hb_008202_030--Hb_023813_010 Hb_008202_030--Hb_000092_210 Hb_008202_030--Hb_003621_010 Hb_008202_030--Hb_007426_240 Hb_009722_020--Hb_023813_010 Hb_009722_020--Hb_000092_210 Hb_009722_020--Hb_007426_240 Hb_000529_120 Hb_000529_120 Hb_009722_020--Hb_000529_120 Hb_023813_010--Hb_000092_210 Hb_023813_010--Hb_007426_240 Hb_023813_010--Hb_000529_120 Hb_000092_210--Hb_007426_240 Hb_000092_210--Hb_000529_120 Hb_000173_300 Hb_000173_300 Hb_000092_210--Hb_000173_300 Hb_069868_010 Hb_069868_010 Hb_003621_010--Hb_069868_010 Hb_000246_140 Hb_000246_140 Hb_003621_010--Hb_000246_140 Hb_075642_010 Hb_075642_010 Hb_003621_010--Hb_075642_010 Hb_005222_010 Hb_005222_010 Hb_003621_010--Hb_005222_010 Hb_007426_240--Hb_000529_120 Hb_007426_240--Hb_000173_300 Hb_026113_020 Hb_026113_020 Hb_007426_240--Hb_026113_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.413919
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.196911 0 0 0

CAGE analysis