Hb_000246_140

Information

Type -
Description -
Location Contig246: 235977-236507
Sequence    

Annotation

kegg
ID rcu:RCOM_1584630
description xylulose kinase, putative (EC:2.7.1.17)
nr
ID XP_002510011.1
description xylulose kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9R6R8
description Xylulose kinase, putative OS=Ricinus communis GN=RCOM_1584630 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000246_140 0.0 - - xylulose kinase, putative [Ricinus communis]
2 Hb_075642_010 0.1432438044 - - PREDICTED: uncharacterized protein LOC105647831 [Jatropha curcas]
3 Hb_003636_050 0.189261013 - - PREDICTED: bark storage protein A-like [Populus euphratica]
4 Hb_003621_010 0.2219933806 - - -
5 Hb_155932_010 0.226828221 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
6 Hb_007761_010 0.2373948971 - - -
7 Hb_128173_010 0.2377396496 - - PREDICTED: uncharacterized protein LOC104219073 [Nicotiana sylvestris]
8 Hb_006692_050 0.2409338728 - - Chloroplastic lipocalin [Theobroma cacao]
9 Hb_111332_010 0.2425252516 - - Dihydroneopterin aldolase [Morus notabilis]
10 Hb_105480_010 0.2460303369 - - -
11 Hb_000003_690 0.2486426554 - - -
12 Hb_005542_020 0.2535689544 - - lupus la ribonucleoprotein, putative [Ricinus communis]
13 Hb_042026_010 0.2602301012 - - RNA binding protein, putative [Ricinus communis]
14 Hb_000795_010 0.2641254108 - - -
15 Hb_013727_010 0.2726710782 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
16 Hb_124567_010 0.2767599212 - - -
17 Hb_096490_010 0.2798722319 - - hypothetical protein CICLE_v100210772mg, partial [Citrus clementina]
18 Hb_009268_110 0.2985429187 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
19 Hb_000800_100 0.2988606187 - - hypothetical protein JCGZ_01543 [Jatropha curcas]
20 Hb_089491_010 0.2996517863 - - -

Gene co-expression network

sample Hb_000246_140 Hb_000246_140 Hb_075642_010 Hb_075642_010 Hb_000246_140--Hb_075642_010 Hb_003636_050 Hb_003636_050 Hb_000246_140--Hb_003636_050 Hb_003621_010 Hb_003621_010 Hb_000246_140--Hb_003621_010 Hb_155932_010 Hb_155932_010 Hb_000246_140--Hb_155932_010 Hb_007761_010 Hb_007761_010 Hb_000246_140--Hb_007761_010 Hb_128173_010 Hb_128173_010 Hb_000246_140--Hb_128173_010 Hb_000003_690 Hb_000003_690 Hb_075642_010--Hb_000003_690 Hb_002365_010 Hb_002365_010 Hb_075642_010--Hb_002365_010 Hb_075642_010--Hb_003621_010 Hb_005222_010 Hb_005222_010 Hb_075642_010--Hb_005222_010 Hb_006692_050 Hb_006692_050 Hb_075642_010--Hb_006692_050 Hb_076583_010 Hb_076583_010 Hb_003636_050--Hb_076583_010 Hb_005542_020 Hb_005542_020 Hb_003636_050--Hb_005542_020 Hb_013727_010 Hb_013727_010 Hb_003636_050--Hb_013727_010 Hb_064951_010 Hb_064951_010 Hb_003636_050--Hb_064951_010 Hb_105480_010 Hb_105480_010 Hb_003636_050--Hb_105480_010 Hb_111332_010 Hb_111332_010 Hb_003636_050--Hb_111332_010 Hb_000800_100 Hb_000800_100 Hb_003621_010--Hb_000800_100 Hb_008202_030 Hb_008202_030 Hb_003621_010--Hb_008202_030 Hb_069868_010 Hb_069868_010 Hb_003621_010--Hb_069868_010 Hb_003621_010--Hb_005222_010 Hb_155932_010--Hb_003636_050 Hb_136856_010 Hb_136856_010 Hb_155932_010--Hb_136856_010 Hb_021068_020 Hb_021068_020 Hb_155932_010--Hb_021068_020 Hb_009066_010 Hb_009066_010 Hb_155932_010--Hb_009066_010 Hb_068347_020 Hb_068347_020 Hb_155932_010--Hb_068347_020 Hb_007761_010--Hb_128173_010 Hb_007761_010--Hb_111332_010 Hb_007761_010--Hb_105480_010 Hb_007761_010--Hb_005542_020 Hb_007761_010--Hb_006692_050 Hb_007761_010--Hb_013727_010 Hb_128173_010--Hb_111332_010 Hb_128173_010--Hb_105480_010 Hb_128173_010--Hb_005542_020 Hb_128173_010--Hb_006692_050 Hb_128173_010--Hb_013727_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.723359 6.55225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.868246 0 0 0

CAGE analysis