Hb_003621_010

Information

Type -
Description -
Location Contig3621: 11647-19781
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003621_010 0.0 - - -
2 Hb_000800_100 0.1558531875 - - hypothetical protein JCGZ_01543 [Jatropha curcas]
3 Hb_008202_030 0.170295285 - - hypothetical protein B456_002G115600 [Gossypium raimondii]
4 Hb_069868_010 0.2182086825 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
5 Hb_000246_140 0.2219933806 - - xylulose kinase, putative [Ricinus communis]
6 Hb_075642_010 0.2325301197 - - PREDICTED: uncharacterized protein LOC105647831 [Jatropha curcas]
7 Hb_005222_010 0.2463309262 - - hypothetical protein MTR_1g033950 [Medicago truncatula]
8 Hb_009722_020 0.2506077521 - - -
9 Hb_007044_150 0.2534173184 - - PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Jatropha curcas]
10 Hb_023813_010 0.2649147048 - - PREDICTED: uncharacterized protein LOC105162193 [Sesamum indicum]
11 Hb_002365_010 0.2743209977 - - hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
12 Hb_096490_010 0.2760907941 - - hypothetical protein CICLE_v100210772mg, partial [Citrus clementina]
13 Hb_017134_020 0.2903231053 - - -
14 Hb_000092_210 0.2955100629 - - -
15 Hb_000005_210 0.2971839715 - - -
16 Hb_000041_170 0.2971839715 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
17 Hb_000047_040 0.2971839715 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
18 Hb_000072_260 0.2971839715 - - hypothetical protein MTR_5g044090 [Medicago truncatula]
19 Hb_000081_170 0.2971839715 - - -
20 Hb_000088_250 0.2971839715 - - -

Gene co-expression network

sample Hb_003621_010 Hb_003621_010 Hb_000800_100 Hb_000800_100 Hb_003621_010--Hb_000800_100 Hb_008202_030 Hb_008202_030 Hb_003621_010--Hb_008202_030 Hb_069868_010 Hb_069868_010 Hb_003621_010--Hb_069868_010 Hb_000246_140 Hb_000246_140 Hb_003621_010--Hb_000246_140 Hb_075642_010 Hb_075642_010 Hb_003621_010--Hb_075642_010 Hb_005222_010 Hb_005222_010 Hb_003621_010--Hb_005222_010 Hb_000800_100--Hb_008202_030 Hb_009722_020 Hb_009722_020 Hb_000800_100--Hb_009722_020 Hb_023813_010 Hb_023813_010 Hb_000800_100--Hb_023813_010 Hb_000092_210 Hb_000092_210 Hb_000800_100--Hb_000092_210 Hb_007426_240 Hb_007426_240 Hb_000800_100--Hb_007426_240 Hb_008202_030--Hb_009722_020 Hb_008202_030--Hb_023813_010 Hb_008202_030--Hb_000092_210 Hb_008202_030--Hb_007426_240 Hb_069868_010--Hb_000800_100 Hb_000252_140 Hb_000252_140 Hb_069868_010--Hb_000252_140 Hb_069868_010--Hb_008202_030 Hb_157340_010 Hb_157340_010 Hb_069868_010--Hb_157340_010 Hb_002046_030 Hb_002046_030 Hb_069868_010--Hb_002046_030 Hb_000246_140--Hb_075642_010 Hb_003636_050 Hb_003636_050 Hb_000246_140--Hb_003636_050 Hb_155932_010 Hb_155932_010 Hb_000246_140--Hb_155932_010 Hb_007761_010 Hb_007761_010 Hb_000246_140--Hb_007761_010 Hb_128173_010 Hb_128173_010 Hb_000246_140--Hb_128173_010 Hb_000003_690 Hb_000003_690 Hb_075642_010--Hb_000003_690 Hb_002365_010 Hb_002365_010 Hb_075642_010--Hb_002365_010 Hb_075642_010--Hb_005222_010 Hb_006692_050 Hb_006692_050 Hb_075642_010--Hb_006692_050 Hb_005222_010--Hb_002365_010 Hb_001544_020 Hb_001544_020 Hb_005222_010--Hb_001544_020 Hb_169488_010 Hb_169488_010 Hb_005222_010--Hb_169488_010 Hb_005222_010--Hb_000003_690
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 2.18408
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.434123 0 0 0

CAGE analysis