Hb_011360_020

Information

Type -
Description -
Location Contig11360: 2351-2956
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011360_020 0.0 - - -
2 Hb_084391_010 0.1204301151 - - xylulose kinase, putative [Ricinus communis]
3 Hb_004699_020 0.2730449946 - - PREDICTED: uncharacterized protein LOC103410170 [Malus domestica]
4 Hb_000103_050 0.2914165059 - - hypothetical protein CICLE_v10006287mg [Citrus clementina]
5 Hb_000756_020 0.2968311011 - - BnaA05g19440D [Brassica napus]
6 Hb_163268_010 0.2981703045 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
7 Hb_001741_130 0.298185703 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]
8 Hb_008516_020 0.2995197883 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
9 Hb_008505_020 0.3005129973 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
10 Hb_033835_020 0.3006728998 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_005531_010 0.3018752 - - hypothetical protein CICLE_v10033008mg [Citrus clementina]
12 Hb_008790_050 0.3023623192 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002240_040 0.3076225274 - - -
14 Hb_167711_040 0.3125229033 - - PREDICTED: cucumisin-like [Jatropha curcas]
15 Hb_000453_220 0.3144437417 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
16 Hb_001623_520 0.3199765197 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
17 Hb_000392_330 0.323967728 - - PREDICTED: protein kinase 2B, chloroplastic-like [Jatropha curcas]
18 Hb_000948_100 0.331147539 - - -
19 Hb_039229_010 0.3380249091 - - -
20 Hb_003972_020 0.3415557837 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011360_020 Hb_011360_020 Hb_084391_010 Hb_084391_010 Hb_011360_020--Hb_084391_010 Hb_004699_020 Hb_004699_020 Hb_011360_020--Hb_004699_020 Hb_000103_050 Hb_000103_050 Hb_011360_020--Hb_000103_050 Hb_000756_020 Hb_000756_020 Hb_011360_020--Hb_000756_020 Hb_163268_010 Hb_163268_010 Hb_011360_020--Hb_163268_010 Hb_001741_130 Hb_001741_130 Hb_011360_020--Hb_001741_130 Hb_001623_520 Hb_001623_520 Hb_084391_010--Hb_001623_520 Hb_084391_010--Hb_004699_020 Hb_003972_020 Hb_003972_020 Hb_084391_010--Hb_003972_020 Hb_084391_010--Hb_000103_050 Hb_008516_020 Hb_008516_020 Hb_084391_010--Hb_008516_020 Hb_004699_020--Hb_001623_520 Hb_007757_140 Hb_007757_140 Hb_004699_020--Hb_007757_140 Hb_128558_010 Hb_128558_010 Hb_004699_020--Hb_128558_010 Hb_000951_040 Hb_000951_040 Hb_004699_020--Hb_000951_040 Hb_013483_010 Hb_013483_010 Hb_000103_050--Hb_013483_010 Hb_001507_010 Hb_001507_010 Hb_000103_050--Hb_001507_010 Hb_010710_050 Hb_010710_050 Hb_000103_050--Hb_010710_050 Hb_000103_050--Hb_008516_020 Hb_148422_010 Hb_148422_010 Hb_000103_050--Hb_148422_010 Hb_000756_020--Hb_163268_010 Hb_000756_020--Hb_001741_130 Hb_008505_020 Hb_008505_020 Hb_000756_020--Hb_008505_020 Hb_033835_020 Hb_033835_020 Hb_000756_020--Hb_033835_020 Hb_005531_010 Hb_005531_010 Hb_000756_020--Hb_005531_010 Hb_002240_040 Hb_002240_040 Hb_000756_020--Hb_002240_040 Hb_163268_010--Hb_001741_130 Hb_163268_010--Hb_008505_020 Hb_163268_010--Hb_033835_020 Hb_163268_010--Hb_005531_010 Hb_163268_010--Hb_002240_040 Hb_001741_130--Hb_008505_020 Hb_001741_130--Hb_033835_020 Hb_001741_130--Hb_005531_010 Hb_001741_130--Hb_002240_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.111393
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.224812 0.337435 0 0

CAGE analysis