Hb_084391_010

Information

Type -
Description -
Location Contig84391: 296-1818
Sequence    

Annotation

kegg
ID rcu:RCOM_1584630
description xylulose kinase, putative (EC:2.7.1.17)
nr
ID XP_002510011.1
description xylulose kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9R6R8
description Xylulose kinase, putative OS=Ricinus communis GN=RCOM_1584630 PE=4 SV=1
Gene Ontology
ID GO:0016772
description xylulose kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084391_010 0.0 - - xylulose kinase, putative [Ricinus communis]
2 Hb_011360_020 0.1204301151 - - -
3 Hb_001623_520 0.2418154723 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
4 Hb_004699_020 0.2576602441 - - PREDICTED: uncharacterized protein LOC103410170 [Malus domestica]
5 Hb_003972_020 0.2661718326 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000103_050 0.2880140315 - - hypothetical protein CICLE_v10006287mg [Citrus clementina]
7 Hb_008516_020 0.3236719894 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
8 Hb_000951_040 0.3345033582 transcription factor TF Family: M-type hypothetical protein JCGZ_09931 [Jatropha curcas]
9 Hb_000453_220 0.3378655282 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
10 Hb_000948_100 0.3534364384 - - -
11 Hb_013483_010 0.3670554807 - - -
12 Hb_000392_330 0.3689072701 - - PREDICTED: protein kinase 2B, chloroplastic-like [Jatropha curcas]
13 Hb_019520_010 0.3714747576 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
14 Hb_128558_010 0.3718973195 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
15 Hb_008790_050 0.379960645 - - conserved hypothetical protein [Ricinus communis]
16 Hb_010710_050 0.3815547024 - - -
17 Hb_000521_040 0.3825534573 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
18 Hb_000370_010 0.3864518415 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
19 Hb_010626_020 0.3908316987 - - -
20 Hb_163268_010 0.3965369125 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]

Gene co-expression network

sample Hb_084391_010 Hb_084391_010 Hb_011360_020 Hb_011360_020 Hb_084391_010--Hb_011360_020 Hb_001623_520 Hb_001623_520 Hb_084391_010--Hb_001623_520 Hb_004699_020 Hb_004699_020 Hb_084391_010--Hb_004699_020 Hb_003972_020 Hb_003972_020 Hb_084391_010--Hb_003972_020 Hb_000103_050 Hb_000103_050 Hb_084391_010--Hb_000103_050 Hb_008516_020 Hb_008516_020 Hb_084391_010--Hb_008516_020 Hb_011360_020--Hb_004699_020 Hb_011360_020--Hb_000103_050 Hb_000756_020 Hb_000756_020 Hb_011360_020--Hb_000756_020 Hb_163268_010 Hb_163268_010 Hb_011360_020--Hb_163268_010 Hb_001741_130 Hb_001741_130 Hb_011360_020--Hb_001741_130 Hb_001623_520--Hb_004699_020 Hb_000951_040 Hb_000951_040 Hb_001623_520--Hb_000951_040 Hb_019520_010 Hb_019520_010 Hb_001623_520--Hb_019520_010 Hb_001623_520--Hb_003972_020 Hb_001623_520--Hb_011360_020 Hb_007757_140 Hb_007757_140 Hb_004699_020--Hb_007757_140 Hb_128558_010 Hb_128558_010 Hb_004699_020--Hb_128558_010 Hb_004699_020--Hb_000951_040 Hb_023813_010 Hb_023813_010 Hb_003972_020--Hb_023813_010 Hb_009722_020 Hb_009722_020 Hb_003972_020--Hb_009722_020 Hb_000092_210 Hb_000092_210 Hb_003972_020--Hb_000092_210 Hb_007426_240 Hb_007426_240 Hb_003972_020--Hb_007426_240 Hb_008202_030 Hb_008202_030 Hb_003972_020--Hb_008202_030 Hb_013483_010 Hb_013483_010 Hb_000103_050--Hb_013483_010 Hb_001507_010 Hb_001507_010 Hb_000103_050--Hb_001507_010 Hb_010710_050 Hb_010710_050 Hb_000103_050--Hb_010710_050 Hb_000103_050--Hb_008516_020 Hb_148422_010 Hb_148422_010 Hb_000103_050--Hb_148422_010 Hb_000392_330 Hb_000392_330 Hb_008516_020--Hb_000392_330 Hb_003086_130 Hb_003086_130 Hb_008516_020--Hb_003086_130 Hb_004048_060 Hb_004048_060 Hb_008516_020--Hb_004048_060 Hb_091433_040 Hb_091433_040 Hb_008516_020--Hb_091433_040 Hb_001534_170 Hb_001534_170 Hb_008516_020--Hb_001534_170 Hb_008516_020--Hb_000951_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.115255
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.109759 0.184996 0 0

CAGE analysis