Hb_010863_070

Information

Type -
Description -
Location Contig10863: 48260-54416
Sequence    

Annotation

kegg
ID rcu:RCOM_0555680
description glutaredoxin, grx, putative
nr
ID XP_012082674.1
description PREDICTED: glutaredoxin-C11 [Jatropha curcas]
swissprot
ID Q9LYC6
description Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1
trembl
ID A0A067K760
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13866 PE=4 SV=1
Gene Ontology
ID GO:0009055
description glutaredoxin-c11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010863_070 0.0 - - PREDICTED: glutaredoxin-C11 [Jatropha curcas]
2 Hb_000289_090 0.1186530091 - - -
3 Hb_012796_030 0.137770677 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
4 Hb_004372_050 0.1466574233 - - putative receptor-like protein kinase [Morus notabilis]
5 Hb_016734_040 0.1558308772 - - abhydrolase domain containing, putative [Ricinus communis]
6 Hb_149345_010 0.1615423613 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
7 Hb_003440_080 0.1674499666 - - polyprotein [Citrus endogenous pararetrovirus]
8 Hb_001355_060 0.1720467981 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
9 Hb_003994_070 0.1753367543 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
10 Hb_067472_010 0.1765724315 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
11 Hb_002973_130 0.1773072652 - - PREDICTED: uncharacterized protein LOC104609908 [Nelumbo nucifera]
12 Hb_005183_030 0.1785291498 - - PREDICTED: probable calcium-binding protein CML16 [Jatropha curcas]
13 Hb_002631_110 0.1786854554 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]
14 Hb_011358_010 0.1794508912 - - -
15 Hb_041813_040 0.1801184893 - - NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5, truncated - sugar beet mitochondrion (mitochondrion) [Beta vulgaris subsp. vulgaris]
16 Hb_000352_060 0.1802748527 - - RNA-directed DNA polymerase [Arachis hypogaea]
17 Hb_002990_020 0.1812969059 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
18 Hb_172486_010 0.1813182416 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
19 Hb_158534_010 0.1822792101 desease resistance Gene Name: NB-ARC NBS-LRR resistance protein RGH1 [Manihot esculenta]
20 Hb_004994_200 0.1838019871 - - PREDICTED: uncharacterized protein LOC105174340 [Sesamum indicum]

Gene co-expression network

sample Hb_010863_070 Hb_010863_070 Hb_000289_090 Hb_000289_090 Hb_010863_070--Hb_000289_090 Hb_012796_030 Hb_012796_030 Hb_010863_070--Hb_012796_030 Hb_004372_050 Hb_004372_050 Hb_010863_070--Hb_004372_050 Hb_016734_040 Hb_016734_040 Hb_010863_070--Hb_016734_040 Hb_149345_010 Hb_149345_010 Hb_010863_070--Hb_149345_010 Hb_003440_080 Hb_003440_080 Hb_010863_070--Hb_003440_080 Hb_000289_090--Hb_012796_030 Hb_000289_090--Hb_003440_080 Hb_004994_200 Hb_004994_200 Hb_000289_090--Hb_004994_200 Hb_119832_010 Hb_119832_010 Hb_000289_090--Hb_119832_010 Hb_000289_090--Hb_004372_050 Hb_012796_030--Hb_003440_080 Hb_000574_340 Hb_000574_340 Hb_012796_030--Hb_000574_340 Hb_005092_090 Hb_005092_090 Hb_012796_030--Hb_005092_090 Hb_006787_070 Hb_006787_070 Hb_012796_030--Hb_006787_070 Hb_012796_030--Hb_004994_200 Hb_002990_020 Hb_002990_020 Hb_004372_050--Hb_002990_020 Hb_167136_010 Hb_167136_010 Hb_004372_050--Hb_167136_010 Hb_002471_280 Hb_002471_280 Hb_004372_050--Hb_002471_280 Hb_004643_020 Hb_004643_020 Hb_004372_050--Hb_004643_020 Hb_042463_010 Hb_042463_010 Hb_016734_040--Hb_042463_010 Hb_005183_030 Hb_005183_030 Hb_016734_040--Hb_005183_030 Hb_169948_010 Hb_169948_010 Hb_016734_040--Hb_169948_010 Hb_094437_020 Hb_094437_020 Hb_016734_040--Hb_094437_020 Hb_016734_040--Hb_149345_010 Hb_002631_110 Hb_002631_110 Hb_016734_040--Hb_002631_110 Hb_001459_020 Hb_001459_020 Hb_149345_010--Hb_001459_020 Hb_093388_010 Hb_093388_010 Hb_149345_010--Hb_093388_010 Hb_029510_060 Hb_029510_060 Hb_149345_010--Hb_029510_060 Hb_001542_010 Hb_001542_010 Hb_149345_010--Hb_001542_010 Hb_172486_010 Hb_172486_010 Hb_149345_010--Hb_172486_010 Hb_003440_080--Hb_000574_340 Hb_000951_070 Hb_000951_070 Hb_003440_080--Hb_000951_070 Hb_003440_080--Hb_119832_010 Hb_027337_130 Hb_027337_130 Hb_003440_080--Hb_027337_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.29156 0.19141 1.19384 0.069038 0.0315125
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0820469 0 0 0.708877 6.37026

CAGE analysis