Hb_004372_050

Information

Type -
Description -
Location Contig4372: 99748-101333
Sequence    

Annotation

kegg
ID pop:POPTR_0017s09520g
description hypothetical protein
nr
ID XP_010111690.1
description putative receptor-like protein kinase [Morus notabilis]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID W9S8Q3
description Putative receptor-like protein kinase OS=Morus notabilis GN=L484_001300 PE=4 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004372_050 0.0 - - putative receptor-like protein kinase [Morus notabilis]
2 Hb_002990_020 0.0940349104 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
3 Hb_167136_010 0.1214620028 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
4 Hb_000289_090 0.1359358511 - - -
5 Hb_010863_070 0.1466574233 - - PREDICTED: glutaredoxin-C11 [Jatropha curcas]
6 Hb_002471_280 0.147879956 - - PREDICTED: cyclin-SDS [Jatropha curcas]
7 Hb_004643_020 0.1499106135 - - hypothetical protein AMTR_s05716p00004100, partial [Amborella trichopoda]
8 Hb_018105_010 0.1631407579 - - hypothetical protein POPTR_0004s08710g [Populus trichocarpa]
9 Hb_009785_020 0.1644220641 - - PREDICTED: nucleolin [Populus euphratica]
10 Hb_119832_010 0.164644084 - - -
11 Hb_000311_110 0.1662099023 - - ATP-binding cassette transporter, putative [Ricinus communis]
12 Hb_149345_010 0.1686161236 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
13 Hb_001999_050 0.1811903627 rubber biosynthesis Gene Name: CPT7 PREDICTED: dehydrodolichyl diphosphate synthase 2 [Jatropha curcas]
14 Hb_012691_060 0.1814840808 - - PREDICTED: isoflavone 2'-hydroxylase-like isoform X1 [Prunus mume]
15 Hb_012796_030 0.1828315056 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
16 Hb_002973_130 0.1831540025 - - PREDICTED: uncharacterized protein LOC104609908 [Nelumbo nucifera]
17 Hb_000269_040 0.1832340545 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_003440_080 0.1848044921 - - polyprotein [Citrus endogenous pararetrovirus]
19 Hb_007575_020 0.1858849201 - - cytochrome P450, putative [Ricinus communis]
20 Hb_002631_110 0.190740405 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]

Gene co-expression network

sample Hb_004372_050 Hb_004372_050 Hb_002990_020 Hb_002990_020 Hb_004372_050--Hb_002990_020 Hb_167136_010 Hb_167136_010 Hb_004372_050--Hb_167136_010 Hb_000289_090 Hb_000289_090 Hb_004372_050--Hb_000289_090 Hb_010863_070 Hb_010863_070 Hb_004372_050--Hb_010863_070 Hb_002471_280 Hb_002471_280 Hb_004372_050--Hb_002471_280 Hb_004643_020 Hb_004643_020 Hb_004372_050--Hb_004643_020 Hb_002990_020--Hb_167136_010 Hb_002990_020--Hb_004643_020 Hb_000138_180 Hb_000138_180 Hb_002990_020--Hb_000138_180 Hb_006827_010 Hb_006827_010 Hb_002990_020--Hb_006827_010 Hb_002990_020--Hb_002471_280 Hb_167136_010--Hb_002471_280 Hb_009785_020 Hb_009785_020 Hb_167136_010--Hb_009785_020 Hb_167136_010--Hb_004643_020 Hb_167136_010--Hb_000138_180 Hb_012796_030 Hb_012796_030 Hb_000289_090--Hb_012796_030 Hb_003440_080 Hb_003440_080 Hb_000289_090--Hb_003440_080 Hb_004994_200 Hb_004994_200 Hb_000289_090--Hb_004994_200 Hb_000289_090--Hb_010863_070 Hb_119832_010 Hb_119832_010 Hb_000289_090--Hb_119832_010 Hb_010863_070--Hb_012796_030 Hb_016734_040 Hb_016734_040 Hb_010863_070--Hb_016734_040 Hb_149345_010 Hb_149345_010 Hb_010863_070--Hb_149345_010 Hb_010863_070--Hb_003440_080 Hb_012691_060 Hb_012691_060 Hb_002471_280--Hb_012691_060 Hb_002471_280--Hb_000138_180 Hb_043127_010 Hb_043127_010 Hb_002471_280--Hb_043127_010 Hb_003796_010 Hb_003796_010 Hb_004643_020--Hb_003796_010 Hb_089305_040 Hb_089305_040 Hb_004643_020--Hb_089305_040 Hb_004951_030 Hb_004951_030 Hb_004643_020--Hb_004951_030 Hb_001300_090 Hb_001300_090 Hb_004643_020--Hb_001300_090 Hb_009393_110 Hb_009393_110 Hb_004643_020--Hb_009393_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.421767 0.0153801 0.180412 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0297186 0.912125

CAGE analysis