Hb_009449_050

Information

Type -
Description -
Location Contig9449: 12968-19918
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa007019mg
description hypothetical protein
nr
ID XP_010251291.1
description PREDICTED: serine/threonine-protein kinase HT1-like [Nelumbo nucifera]
swissprot
ID Q2MHE4
description Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1
trembl
ID M5WD75
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007019mg PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase ht1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009449_050 0.0 - - PREDICTED: serine/threonine-protein kinase HT1-like [Nelumbo nucifera]
2 Hb_023301_010 0.314051438 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
3 Hb_012022_130 0.318312356 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
4 Hb_003058_250 0.3206265005 - - hypothetical protein RCOM_0006440 [Ricinus communis]
5 Hb_000922_120 0.3413379498 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
6 Hb_002228_060 0.3482300026 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
7 Hb_000179_120 0.3494504184 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]
8 Hb_007120_040 0.3697978683 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002836_080 0.3741237135 - - -
10 Hb_024154_020 0.3761669044 - - polyphenol oxidase [Hevea brasiliensis]
11 Hb_000345_060 0.3790637545 - - PREDICTED: REF/SRPP-like protein At3g05500 [Jatropha curcas]
12 Hb_000042_220 0.3847882084 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
13 Hb_002316_010 0.3890352106 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
14 Hb_000003_850 0.3904726654 - - PREDICTED: uncharacterized protein LOC105633597 [Jatropha curcas]
15 Hb_002793_080 0.3969497599 - - ribonuclease t2, putative [Ricinus communis]
16 Hb_000733_150 0.3981030372 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Populus euphratica]
17 Hb_000649_100 0.4024850987 - - unnamed protein product [Vitis vinifera]
18 Hb_005700_010 0.4038859931 - - PREDICTED: uncharacterized protein LOC104898079 [Beta vulgaris subsp. vulgaris]
19 Hb_001712_040 0.405665459 - - Calmodulin, putative [Ricinus communis]
20 Hb_000895_080 0.4089719958 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_009449_050 Hb_009449_050 Hb_023301_010 Hb_023301_010 Hb_009449_050--Hb_023301_010 Hb_012022_130 Hb_012022_130 Hb_009449_050--Hb_012022_130 Hb_003058_250 Hb_003058_250 Hb_009449_050--Hb_003058_250 Hb_000922_120 Hb_000922_120 Hb_009449_050--Hb_000922_120 Hb_002228_060 Hb_002228_060 Hb_009449_050--Hb_002228_060 Hb_000179_120 Hb_000179_120 Hb_009449_050--Hb_000179_120 Hb_023301_010--Hb_000922_120 Hb_023301_010--Hb_012022_130 Hb_000210_100 Hb_000210_100 Hb_023301_010--Hb_000210_100 Hb_001454_100 Hb_001454_100 Hb_023301_010--Hb_001454_100 Hb_023301_010--Hb_000179_120 Hb_000217_010 Hb_000217_010 Hb_023301_010--Hb_000217_010 Hb_012022_130--Hb_000922_120 Hb_144484_010 Hb_144484_010 Hb_012022_130--Hb_144484_010 Hb_001712_040 Hb_001712_040 Hb_012022_130--Hb_001712_040 Hb_001504_140 Hb_001504_140 Hb_012022_130--Hb_001504_140 Hb_000138_170 Hb_000138_170 Hb_012022_130--Hb_000138_170 Hb_000733_150 Hb_000733_150 Hb_003058_250--Hb_000733_150 Hb_002793_080 Hb_002793_080 Hb_003058_250--Hb_002793_080 Hb_036537_010 Hb_036537_010 Hb_003058_250--Hb_036537_010 Hb_000003_850 Hb_000003_850 Hb_003058_250--Hb_000003_850 Hb_051055_010 Hb_051055_010 Hb_003058_250--Hb_051055_010 Hb_000922_120--Hb_001454_100 Hb_000922_120--Hb_144484_010 Hb_000922_120--Hb_001712_040 Hb_011472_010 Hb_011472_010 Hb_000922_120--Hb_011472_010 Hb_024154_020 Hb_024154_020 Hb_002228_060--Hb_024154_020 Hb_000649_100 Hb_000649_100 Hb_002228_060--Hb_000649_100 Hb_002893_160 Hb_002893_160 Hb_002228_060--Hb_002893_160 Hb_010896_020 Hb_010896_020 Hb_002228_060--Hb_010896_020 Hb_000510_020 Hb_000510_020 Hb_002228_060--Hb_000510_020 Hb_144451_010 Hb_144451_010 Hb_002228_060--Hb_144451_010 Hb_000179_120--Hb_000217_010 Hb_034299_070 Hb_034299_070 Hb_000179_120--Hb_034299_070 Hb_000345_060 Hb_000345_060 Hb_000179_120--Hb_000345_060 Hb_000483_400 Hb_000483_400 Hb_000179_120--Hb_000483_400 Hb_002572_030 Hb_002572_030 Hb_000179_120--Hb_002572_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0236557 0 0 0.110879 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0433358 0 0.0632269 0 0

CAGE analysis