Hb_009189_050

Information

Type -
Description -
Location Contig9189: 43993-45537
Sequence    

Annotation

kegg
ID tcc:TCM_021583
description Methyltransferases
nr
ID XP_012089751.1
description PREDICTED: uncharacterized protein LOC105648080 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JS43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00402 PE=4 SV=1
Gene Ontology
ID GO:0005622
description PREDICTED: uncharacterized protein LOC105648080

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62316: 43623-45660
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009189_050 0.0 - - PREDICTED: uncharacterized protein LOC105648080 [Jatropha curcas]
2 Hb_000371_120 0.1169139399 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
3 Hb_001474_050 0.1430489316 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
4 Hb_002343_010 0.1496315205 - - amino acid binding protein, putative [Ricinus communis]
5 Hb_000077_160 0.1627802807 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
6 Hb_002759_260 0.1648005527 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
7 Hb_003209_090 0.1659989604 - - Xyloglucan endotransglucosylase/hydrolase family protein [Theobroma cacao]
8 Hb_001511_250 0.1660731736 - - fatty acid desaturase [Manihot esculenta]
9 Hb_001102_200 0.1684400255 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Jatropha curcas]
10 Hb_009862_020 0.1687192284 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
11 Hb_000923_100 0.1703314768 - - chloride channel clc, putative [Ricinus communis]
12 Hb_000120_090 0.1711051255 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
13 Hb_001226_170 0.1721088682 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
14 Hb_001898_130 0.1723009575 - - ATP binding protein, putative [Ricinus communis]
15 Hb_002983_110 0.1739089886 - - PREDICTED: uncharacterized protein LOC105634780 [Jatropha curcas]
16 Hb_000028_430 0.1744098591 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
17 Hb_005162_140 0.1746385465 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
18 Hb_000110_260 0.176814752 - - PREDICTED: uncharacterized protein LOC105642009 [Jatropha curcas]
19 Hb_003849_190 0.1774540238 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
20 Hb_001621_050 0.1849320396 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]

Gene co-expression network

sample Hb_009189_050 Hb_009189_050 Hb_000371_120 Hb_000371_120 Hb_009189_050--Hb_000371_120 Hb_001474_050 Hb_001474_050 Hb_009189_050--Hb_001474_050 Hb_002343_010 Hb_002343_010 Hb_009189_050--Hb_002343_010 Hb_000077_160 Hb_000077_160 Hb_009189_050--Hb_000077_160 Hb_002759_260 Hb_002759_260 Hb_009189_050--Hb_002759_260 Hb_003209_090 Hb_003209_090 Hb_009189_050--Hb_003209_090 Hb_000371_120--Hb_000077_160 Hb_000371_120--Hb_003209_090 Hb_001102_200 Hb_001102_200 Hb_000371_120--Hb_001102_200 Hb_005408_080 Hb_005408_080 Hb_000371_120--Hb_005408_080 Hb_000371_120--Hb_001474_050 Hb_001898_130 Hb_001898_130 Hb_001474_050--Hb_001898_130 Hb_005332_140 Hb_005332_140 Hb_001474_050--Hb_005332_140 Hb_000735_140 Hb_000735_140 Hb_001474_050--Hb_000735_140 Hb_003849_190 Hb_003849_190 Hb_001474_050--Hb_003849_190 Hb_001474_050--Hb_001102_200 Hb_143766_030 Hb_143766_030 Hb_001474_050--Hb_143766_030 Hb_001054_070 Hb_001054_070 Hb_002343_010--Hb_001054_070 Hb_002774_200 Hb_002774_200 Hb_002343_010--Hb_002774_200 Hb_012762_040 Hb_012762_040 Hb_002343_010--Hb_012762_040 Hb_001616_110 Hb_001616_110 Hb_002343_010--Hb_001616_110 Hb_001269_370 Hb_001269_370 Hb_002343_010--Hb_001269_370 Hb_121089_020 Hb_121089_020 Hb_002343_010--Hb_121089_020 Hb_000923_100 Hb_000923_100 Hb_000077_160--Hb_000923_100 Hb_000077_160--Hb_003849_190 Hb_000028_430 Hb_000028_430 Hb_000077_160--Hb_000028_430 Hb_000110_260 Hb_000110_260 Hb_000077_160--Hb_000110_260 Hb_002078_290 Hb_002078_290 Hb_000077_160--Hb_002078_290 Hb_002875_070 Hb_002875_070 Hb_002759_260--Hb_002875_070 Hb_023344_110 Hb_023344_110 Hb_002759_260--Hb_023344_110 Hb_002759_260--Hb_003849_190 Hb_002450_030 Hb_002450_030 Hb_002759_260--Hb_002450_030 Hb_000042_330 Hb_000042_330 Hb_002759_260--Hb_000042_330 Hb_001511_190 Hb_001511_190 Hb_002759_260--Hb_001511_190 Hb_182970_010 Hb_182970_010 Hb_003209_090--Hb_182970_010 Hb_097634_010 Hb_097634_010 Hb_003209_090--Hb_097634_010 Hb_002400_040 Hb_002400_040 Hb_003209_090--Hb_002400_040 Hb_004241_200 Hb_004241_200 Hb_003209_090--Hb_004241_200 Hb_003209_090--Hb_000077_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.7175 137.945 82.9486 107.357 1.33338 0.969664
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.1536 28.0711 36.1819 9.28631 75.7108

CAGE analysis