Hb_008695_030

Information

Type -
Description -
Location Contig8695: 31337-33295
Sequence    

Annotation

kegg
ID rcu:RCOM_1032650
description hypothetical protein
nr
ID KDP32751.1
description hypothetical protein JCGZ_12043 [Jatropha curcas]
swissprot
ID A2WY46
description Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2 PE=2 SV=1
trembl
ID A0A067K969
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12043 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008695_030 0.0 - - hypothetical protein JCGZ_12043 [Jatropha curcas]
2 Hb_002063_030 0.2323116608 - - -
3 Hb_003100_010 0.2507234361 - - PREDICTED: uncharacterized protein LOC101217345 [Cucumis sativus]
4 Hb_015978_030 0.2527011133 - - Zinc finger protein GIS2 [Medicago truncatula]
5 Hb_001514_040 0.2682690721 - - l-asparaginase, putative [Ricinus communis]
6 Hb_054886_010 0.2710828877 - - conserved hypothetical protein [Ricinus communis]
7 Hb_179860_010 0.2716402738 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002760_060 0.2753253134 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
9 Hb_005725_190 0.2768852925 - - hypothetical protein JCGZ_15992 [Jatropha curcas]
10 Hb_002641_100 0.2776066955 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
11 Hb_008453_070 0.2783726637 - - putative aquaporin [Vitis vinifera]
12 Hb_003086_050 0.2785510599 - - calcium-dependent protein kinase, putative [Ricinus communis]
13 Hb_001922_160 0.2820774462 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
14 Hb_007218_140 0.282850706 - - hypothetical protein JCGZ_24847 [Jatropha curcas]
15 Hb_003095_050 0.2844903425 - - PREDICTED: transmembrane protein 45B [Jatropha curcas]
16 Hb_001277_140 0.2848445423 - - PREDICTED: plasma membrane calcium-transporting ATPase 2-like [Takifugu rubripes]
17 Hb_017647_020 0.2863995991 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
18 Hb_001277_150 0.2866607925 - - hypothetical protein VITISV_043492 [Vitis vinifera]
19 Hb_003053_060 0.2872022491 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
20 Hb_000072_330 0.2877243713 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_008695_030 Hb_008695_030 Hb_002063_030 Hb_002063_030 Hb_008695_030--Hb_002063_030 Hb_003100_010 Hb_003100_010 Hb_008695_030--Hb_003100_010 Hb_015978_030 Hb_015978_030 Hb_008695_030--Hb_015978_030 Hb_001514_040 Hb_001514_040 Hb_008695_030--Hb_001514_040 Hb_054886_010 Hb_054886_010 Hb_008695_030--Hb_054886_010 Hb_179860_010 Hb_179860_010 Hb_008695_030--Hb_179860_010 Hb_001902_150 Hb_001902_150 Hb_002063_030--Hb_001902_150 Hb_001189_060 Hb_001189_060 Hb_002063_030--Hb_001189_060 Hb_007218_140 Hb_007218_140 Hb_002063_030--Hb_007218_140 Hb_017647_020 Hb_017647_020 Hb_002063_030--Hb_017647_020 Hb_000275_070 Hb_000275_070 Hb_002063_030--Hb_000275_070 Hb_000142_020 Hb_000142_020 Hb_003100_010--Hb_000142_020 Hb_000625_110 Hb_000625_110 Hb_003100_010--Hb_000625_110 Hb_038758_010 Hb_038758_010 Hb_003100_010--Hb_038758_010 Hb_008453_070 Hb_008453_070 Hb_003100_010--Hb_008453_070 Hb_003100_010--Hb_002063_030 Hb_003053_060 Hb_003053_060 Hb_015978_030--Hb_003053_060 Hb_003086_050 Hb_003086_050 Hb_015978_030--Hb_003086_050 Hb_000072_330 Hb_000072_330 Hb_015978_030--Hb_000072_330 Hb_004324_290 Hb_004324_290 Hb_015978_030--Hb_004324_290 Hb_013057_030 Hb_013057_030 Hb_015978_030--Hb_013057_030 Hb_003095_050 Hb_003095_050 Hb_015978_030--Hb_003095_050 Hb_001922_160 Hb_001922_160 Hb_001514_040--Hb_001922_160 Hb_002760_060 Hb_002760_060 Hb_001514_040--Hb_002760_060 Hb_003442_050 Hb_003442_050 Hb_001514_040--Hb_003442_050 Hb_001514_040--Hb_013057_030 Hb_048653_040 Hb_048653_040 Hb_001514_040--Hb_048653_040 Hb_033153_010 Hb_033153_010 Hb_001514_040--Hb_033153_010 Hb_001985_010 Hb_001985_010 Hb_054886_010--Hb_001985_010 Hb_028487_080 Hb_028487_080 Hb_054886_010--Hb_028487_080 Hb_000414_100 Hb_000414_100 Hb_054886_010--Hb_000414_100 Hb_027556_080 Hb_027556_080 Hb_054886_010--Hb_027556_080 Hb_005529_050 Hb_005529_050 Hb_054886_010--Hb_005529_050 Hb_001277_150 Hb_001277_150 Hb_054886_010--Hb_001277_150 Hb_005000_230 Hb_005000_230 Hb_179860_010--Hb_005000_230 Hb_002864_040 Hb_002864_040 Hb_179860_010--Hb_002864_040 Hb_045414_010 Hb_045414_010 Hb_179860_010--Hb_045414_010 Hb_000155_100 Hb_000155_100 Hb_179860_010--Hb_000155_100 Hb_000645_100 Hb_000645_100 Hb_179860_010--Hb_000645_100 Hb_005643_020 Hb_005643_020 Hb_179860_010--Hb_005643_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0428781 1.60179 0 0 0.0172458 0.0330439
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.117834 0.123589 0 0.024742 0.064039

CAGE analysis