Hb_005529_050

Information

Type -
Description -
Location Contig5529: 95970-97490
Sequence    

Annotation

kegg
ID mus:103971101
description cytochrome P450 94C1-like
nr
ID XP_010247229.1
description PREDICTED: cytochrome P450 94B3-like [Nelumbo nucifera]
swissprot
ID P98188
description Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1
trembl
ID B8AAX2
description Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04118 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 94a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005529_050 0.0 - - PREDICTED: cytochrome P450 94B3-like [Nelumbo nucifera]
2 Hb_027556_080 0.0828144326 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Jatropha curcas]
3 Hb_028487_080 0.0860430695 - - Pectinesterase-1 precursor, putative [Ricinus communis]
4 Hb_004096_040 0.0937771692 - - cytochrome P450, putative [Ricinus communis]
5 Hb_000876_060 0.0997538406 - - conserved hypothetical protein [Ricinus communis]
6 Hb_015473_020 0.1049597771 - - hypothetical protein B456_001G090400 [Gossypium raimondii]
7 Hb_000846_020 0.1085542304 - - cytochrome P450, putative [Ricinus communis]
8 Hb_001821_070 0.1089438251 - - Uncharacterized protein TCM_038456 [Theobroma cacao]
9 Hb_163950_060 0.1121930892 - - multidrug resistance pump, putative [Ricinus communis]
10 Hb_001985_010 0.1147876562 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001796_010 0.1149744794 - - purine transporter, putative [Ricinus communis]
12 Hb_186671_020 0.1175401897 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_003973_050 0.1196762247 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like isoform X1 [Populus euphratica]
14 Hb_011980_020 0.1203388083 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_000336_170 0.1228133364 - - Polcalcin Jun o, putative [Ricinus communis]
16 Hb_000215_120 0.1243987726 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
17 Hb_005687_020 0.1257125561 - - P66 protein [Hevea brasiliensis]
18 Hb_000635_170 0.1279875072 - - cytochrome P450, putative [Ricinus communis]
19 Hb_018609_010 0.1306909923 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000979_270 0.1335920919 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]

Gene co-expression network

sample Hb_005529_050 Hb_005529_050 Hb_027556_080 Hb_027556_080 Hb_005529_050--Hb_027556_080 Hb_028487_080 Hb_028487_080 Hb_005529_050--Hb_028487_080 Hb_004096_040 Hb_004096_040 Hb_005529_050--Hb_004096_040 Hb_000876_060 Hb_000876_060 Hb_005529_050--Hb_000876_060 Hb_015473_020 Hb_015473_020 Hb_005529_050--Hb_015473_020 Hb_000846_020 Hb_000846_020 Hb_005529_050--Hb_000846_020 Hb_163950_060 Hb_163950_060 Hb_027556_080--Hb_163950_060 Hb_011980_020 Hb_011980_020 Hb_027556_080--Hb_011980_020 Hb_001985_010 Hb_001985_010 Hb_027556_080--Hb_001985_010 Hb_000336_170 Hb_000336_170 Hb_027556_080--Hb_000336_170 Hb_007943_040 Hb_007943_040 Hb_027556_080--Hb_007943_040 Hb_028487_080--Hb_015473_020 Hb_001821_070 Hb_001821_070 Hb_028487_080--Hb_001821_070 Hb_001031_020 Hb_001031_020 Hb_028487_080--Hb_001031_020 Hb_028487_080--Hb_000846_020 Hb_000635_170 Hb_000635_170 Hb_028487_080--Hb_000635_170 Hb_000395_160 Hb_000395_160 Hb_004096_040--Hb_000395_160 Hb_186671_020 Hb_186671_020 Hb_004096_040--Hb_186671_020 Hb_004096_040--Hb_163950_060 Hb_005687_020 Hb_005687_020 Hb_004096_040--Hb_005687_020 Hb_000979_270 Hb_000979_270 Hb_004096_040--Hb_000979_270 Hb_004096_040--Hb_000876_060 Hb_000876_060--Hb_000846_020 Hb_002864_040 Hb_002864_040 Hb_000876_060--Hb_002864_040 Hb_000876_060--Hb_015473_020 Hb_000876_060--Hb_001821_070 Hb_015473_020--Hb_001821_070 Hb_000522_020 Hb_000522_020 Hb_015473_020--Hb_000522_020 Hb_015473_020--Hb_000846_020 Hb_000501_180 Hb_000501_180 Hb_015473_020--Hb_000501_180 Hb_000846_020--Hb_001821_070 Hb_000846_020--Hb_004096_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0134926 2.56725 0 0.0395775 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00964954 0.0506133

CAGE analysis