Hb_002063_030

Information

Type -
Description -
Location Contig2063: 65806-67909
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21264: 56689-67201
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002063_030 0.0 - - -
2 Hb_001902_150 0.1976482485 - - PREDICTED: cytokinin hydroxylase-like [Jatropha curcas]
3 Hb_001189_060 0.2266507641 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
4 Hb_007218_140 0.2301382228 - - hypothetical protein JCGZ_24847 [Jatropha curcas]
5 Hb_008695_030 0.2323116608 - - hypothetical protein JCGZ_12043 [Jatropha curcas]
6 Hb_017647_020 0.2463986817 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
7 Hb_000275_070 0.2540016585 - - PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Jatropha curcas]
8 Hb_003100_010 0.2690803104 - - PREDICTED: uncharacterized protein LOC101217345 [Cucumis sativus]
9 Hb_006907_120 0.2833181362 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
10 Hb_007105_010 0.2911317295 - - PREDICTED: uncharacterized protein LOC103455579 [Malus domestica]
11 Hb_000155_100 0.2954183671 - - Protein MLO, putative [Ricinus communis]
12 Hb_000186_210 0.2983336503 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
13 Hb_003018_070 0.3029659017 - - SAUR family protein, partial [Theobroma cacao]
14 Hb_005725_190 0.303946741 - - hypothetical protein JCGZ_15992 [Jatropha curcas]
15 Hb_002401_010 0.3042847747 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
16 Hb_008195_040 0.3048920428 - - hypothetical protein VITISV_033788 [Vitis vinifera]
17 Hb_098988_010 0.3104924814 - - hypothetical protein JCGZ_18539 [Jatropha curcas]
18 Hb_000167_020 0.3136337562 - - -
19 Hb_002211_040 0.3148016977 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
20 Hb_000072_330 0.3168023965 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002063_030 Hb_002063_030 Hb_001902_150 Hb_001902_150 Hb_002063_030--Hb_001902_150 Hb_001189_060 Hb_001189_060 Hb_002063_030--Hb_001189_060 Hb_007218_140 Hb_007218_140 Hb_002063_030--Hb_007218_140 Hb_008695_030 Hb_008695_030 Hb_002063_030--Hb_008695_030 Hb_017647_020 Hb_017647_020 Hb_002063_030--Hb_017647_020 Hb_000275_070 Hb_000275_070 Hb_002063_030--Hb_000275_070 Hb_001902_150--Hb_007218_140 Hb_000072_330 Hb_000072_330 Hb_001902_150--Hb_000072_330 Hb_005048_050 Hb_005048_050 Hb_001902_150--Hb_005048_050 Hb_001902_150--Hb_000275_070 Hb_001902_150--Hb_001189_060 Hb_003018_070 Hb_003018_070 Hb_001189_060--Hb_003018_070 Hb_000186_210 Hb_000186_210 Hb_001189_060--Hb_000186_210 Hb_006907_120 Hb_006907_120 Hb_001189_060--Hb_006907_120 Hb_007105_010 Hb_007105_010 Hb_001189_060--Hb_007105_010 Hb_007218_140--Hb_000072_330 Hb_065500_040 Hb_065500_040 Hb_007218_140--Hb_065500_040 Hb_000574_120 Hb_000574_120 Hb_007218_140--Hb_000574_120 Hb_007218_140--Hb_000275_070 Hb_000975_330 Hb_000975_330 Hb_007218_140--Hb_000975_330 Hb_003100_010 Hb_003100_010 Hb_008695_030--Hb_003100_010 Hb_015978_030 Hb_015978_030 Hb_008695_030--Hb_015978_030 Hb_001514_040 Hb_001514_040 Hb_008695_030--Hb_001514_040 Hb_054886_010 Hb_054886_010 Hb_008695_030--Hb_054886_010 Hb_179860_010 Hb_179860_010 Hb_008695_030--Hb_179860_010 Hb_001985_010 Hb_001985_010 Hb_017647_020--Hb_001985_010 Hb_000004_150 Hb_000004_150 Hb_017647_020--Hb_000004_150 Hb_000007_170 Hb_000007_170 Hb_017647_020--Hb_000007_170 Hb_000010_280 Hb_000010_280 Hb_017647_020--Hb_000010_280 Hb_000022_220 Hb_000022_220 Hb_017647_020--Hb_000022_220 Hb_000045_120 Hb_000045_120 Hb_017647_020--Hb_000045_120 Hb_005725_190 Hb_005725_190 Hb_000275_070--Hb_005725_190 Hb_000142_010 Hb_000142_010 Hb_000275_070--Hb_000142_010 Hb_000275_070--Hb_000574_120 Hb_013057_030 Hb_013057_030 Hb_000275_070--Hb_013057_030 Hb_000172_300 Hb_000172_300 Hb_000275_070--Hb_000172_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 22.8952 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.51261 4.13602 0 0.910734 0

CAGE analysis