Hb_001514_040

Information

Type -
Description -
Location Contig1514: 36346-38100
Sequence    

Annotation

kegg
ID rcu:RCOM_1589270
description l-asparaginase, putative (EC:3.5.1.1)
nr
ID XP_002510160.1
description l-asparaginase, putative [Ricinus communis]
swissprot
ID Q8GXG1
description Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2
trembl
ID B9R767
description L-asparaginase, putative OS=Ricinus communis GN=RCOM_1589270 PE=4 SV=1
Gene Ontology
ID GO:0004067
description probable isoaspartyl peptidase l-asparaginase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12823: 36302-37079
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001514_040 0.0 - - l-asparaginase, putative [Ricinus communis]
2 Hb_001922_160 0.1103815278 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
3 Hb_002760_060 0.1494073993 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
4 Hb_003442_050 0.1591927327 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
5 Hb_013057_030 0.1618320221 - - conserved hypothetical protein [Ricinus communis]
6 Hb_048653_040 0.1758521338 - - ankyrin repeat family protein [Populus trichocarpa]
7 Hb_033153_010 0.1824057308 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
8 Hb_001277_150 0.188134912 - - hypothetical protein VITISV_043492 [Vitis vinifera]
9 Hb_002217_440 0.1886352914 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_007850_050 0.1913404532 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
11 Hb_002701_140 0.2018276917 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]
12 Hb_005000_230 0.202846976 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
13 Hb_116349_050 0.2050709009 - - formin homology 2 domain-containing family protein [Populus trichocarpa]
14 Hb_001403_070 0.2061401065 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Populus euphratica]
15 Hb_015978_030 0.2070285453 - - Zinc finger protein GIS2 [Medicago truncatula]
16 Hb_000871_020 0.2075783452 - - receptor-kinase, putative [Ricinus communis]
17 Hb_000284_060 0.2080150816 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
18 Hb_000016_290 0.208055818 - - multidrug resistance pump, putative [Ricinus communis]
19 Hb_004161_010 0.2082999234 - - hypothetical protein JCGZ_21278 [Jatropha curcas]
20 Hb_138575_010 0.2095342036 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]

Gene co-expression network

sample Hb_001514_040 Hb_001514_040 Hb_001922_160 Hb_001922_160 Hb_001514_040--Hb_001922_160 Hb_002760_060 Hb_002760_060 Hb_001514_040--Hb_002760_060 Hb_003442_050 Hb_003442_050 Hb_001514_040--Hb_003442_050 Hb_013057_030 Hb_013057_030 Hb_001514_040--Hb_013057_030 Hb_048653_040 Hb_048653_040 Hb_001514_040--Hb_048653_040 Hb_033153_010 Hb_033153_010 Hb_001514_040--Hb_033153_010 Hb_001922_160--Hb_002760_060 Hb_003893_020 Hb_003893_020 Hb_001922_160--Hb_003893_020 Hb_001922_160--Hb_003442_050 Hb_001922_160--Hb_013057_030 Hb_001277_150 Hb_001277_150 Hb_001922_160--Hb_001277_150 Hb_002760_060--Hb_033153_010 Hb_000414_100 Hb_000414_100 Hb_002760_060--Hb_000414_100 Hb_174829_040 Hb_174829_040 Hb_002760_060--Hb_174829_040 Hb_002760_060--Hb_001277_150 Hb_011671_290 Hb_011671_290 Hb_002760_060--Hb_011671_290 Hb_003442_050--Hb_002760_060 Hb_000039_100 Hb_000039_100 Hb_003442_050--Hb_000039_100 Hb_000172_300 Hb_000172_300 Hb_003442_050--Hb_000172_300 Hb_005081_060 Hb_005081_060 Hb_003442_050--Hb_005081_060 Hb_003442_050--Hb_048653_040 Hb_002217_440 Hb_002217_440 Hb_013057_030--Hb_002217_440 Hb_013057_030--Hb_048653_040 Hb_048653_020 Hb_048653_020 Hb_013057_030--Hb_048653_020 Hb_013057_030--Hb_000172_300 Hb_116349_050 Hb_116349_050 Hb_013057_030--Hb_116349_050 Hb_003086_050 Hb_003086_050 Hb_013057_030--Hb_003086_050 Hb_048653_040--Hb_000172_300 Hb_048653_040--Hb_000039_100 Hb_011054_030 Hb_011054_030 Hb_048653_040--Hb_011054_030 Hb_001437_200 Hb_001437_200 Hb_048653_040--Hb_001437_200 Hb_055706_010 Hb_055706_010 Hb_048653_040--Hb_055706_010 Hb_048653_040--Hb_116349_050 Hb_033153_010--Hb_000414_100 Hb_005648_030 Hb_005648_030 Hb_033153_010--Hb_005648_030 Hb_001405_260 Hb_001405_260 Hb_033153_010--Hb_001405_260 Hb_005588_010 Hb_005588_010 Hb_033153_010--Hb_005588_010 Hb_007850_050 Hb_007850_050 Hb_033153_010--Hb_007850_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.28025 527.626 9.64901 8.77143 17.9098 12.3615
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.04864 2.07398 2.617 35.2074 3.90551

CAGE analysis