Hb_001902_150

Information

Type -
Description -
Location Contig1902: 103168-106913
Sequence    

Annotation

kegg
ID pop:POPTR_0015s13020g
description POPTRDRAFT_575832; hypothetical protein
nr
ID XP_012090250.1
description PREDICTED: cytokinin hydroxylase-like [Jatropha curcas]
swissprot
ID Q2QYH7
description Cytochrome P450 714C2 OS=Oryza sativa subsp. japonica GN=CYP714C2 PE=2 SV=1
trembl
ID B9ID94
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13020g PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytokinin hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001902_150 0.0 - - PREDICTED: cytokinin hydroxylase-like [Jatropha curcas]
2 Hb_007218_140 0.1651470031 - - hypothetical protein JCGZ_24847 [Jatropha curcas]
3 Hb_002063_030 0.1976482485 - - -
4 Hb_000072_330 0.2314977641 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005048_050 0.2377257285 - - Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative [Ricinus communis]
6 Hb_000275_070 0.2457053506 - - PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Jatropha curcas]
7 Hb_001189_060 0.2470052452 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
8 Hb_065500_040 0.2510690099 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000975_330 0.2566522084 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
10 Hb_008864_070 0.2656186772 - - PREDICTED: uncharacterized protein LOC105803851 [Gossypium raimondii]
11 Hb_002211_040 0.2673822543 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
12 Hb_003018_070 0.2836808023 - - SAUR family protein, partial [Theobroma cacao]
13 Hb_002401_010 0.2849264763 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
14 Hb_006096_010 0.2855216079 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002301_200 0.2880058074 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 12 [Jatropha curcas]
16 Hb_000574_120 0.2885367478 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005725_190 0.295051998 - - hypothetical protein JCGZ_15992 [Jatropha curcas]
18 Hb_006907_120 0.2982104295 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
19 Hb_001863_440 0.299190976 - - Nodulin-26, putative [Ricinus communis]
20 Hb_000186_210 0.2996468921 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_001902_150 Hb_001902_150 Hb_007218_140 Hb_007218_140 Hb_001902_150--Hb_007218_140 Hb_002063_030 Hb_002063_030 Hb_001902_150--Hb_002063_030 Hb_000072_330 Hb_000072_330 Hb_001902_150--Hb_000072_330 Hb_005048_050 Hb_005048_050 Hb_001902_150--Hb_005048_050 Hb_000275_070 Hb_000275_070 Hb_001902_150--Hb_000275_070 Hb_001189_060 Hb_001189_060 Hb_001902_150--Hb_001189_060 Hb_007218_140--Hb_000072_330 Hb_065500_040 Hb_065500_040 Hb_007218_140--Hb_065500_040 Hb_000574_120 Hb_000574_120 Hb_007218_140--Hb_000574_120 Hb_007218_140--Hb_000275_070 Hb_000975_330 Hb_000975_330 Hb_007218_140--Hb_000975_330 Hb_002063_030--Hb_001189_060 Hb_002063_030--Hb_007218_140 Hb_008695_030 Hb_008695_030 Hb_002063_030--Hb_008695_030 Hb_017647_020 Hb_017647_020 Hb_002063_030--Hb_017647_020 Hb_002063_030--Hb_000275_070 Hb_000072_330--Hb_000574_120 Hb_000072_330--Hb_000975_330 Hb_004324_290 Hb_004324_290 Hb_000072_330--Hb_004324_290 Hb_015978_030 Hb_015978_030 Hb_000072_330--Hb_015978_030 Hb_000072_330--Hb_065500_040 Hb_005048_050--Hb_000975_330 Hb_001113_030 Hb_001113_030 Hb_005048_050--Hb_001113_030 Hb_005048_050--Hb_065500_040 Hb_000111_300 Hb_000111_300 Hb_005048_050--Hb_000111_300 Hb_000672_150 Hb_000672_150 Hb_005048_050--Hb_000672_150 Hb_002301_200 Hb_002301_200 Hb_005048_050--Hb_002301_200 Hb_005725_190 Hb_005725_190 Hb_000275_070--Hb_005725_190 Hb_000142_010 Hb_000142_010 Hb_000275_070--Hb_000142_010 Hb_000275_070--Hb_000574_120 Hb_013057_030 Hb_013057_030 Hb_000275_070--Hb_013057_030 Hb_000172_300 Hb_000172_300 Hb_000275_070--Hb_000172_300 Hb_003018_070 Hb_003018_070 Hb_001189_060--Hb_003018_070 Hb_000186_210 Hb_000186_210 Hb_001189_060--Hb_000186_210 Hb_006907_120 Hb_006907_120 Hb_001189_060--Hb_006907_120 Hb_007105_010 Hb_007105_010 Hb_001189_060--Hb_007105_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.727543 0.0200378 0.00958335 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0895627 0.211388 0.0441933 0.046852 0

CAGE analysis