Hb_005725_190

Information

Type -
Description -
Location Contig5725: 98239-98736
Sequence    

Annotation

kegg
ID rcu:RCOM_1586460
description hypothetical protein
nr
ID KDP41585.1
description hypothetical protein JCGZ_15992 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAQ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15992 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005725_190 0.0 - - hypothetical protein JCGZ_15992 [Jatropha curcas]
2 Hb_000275_070 0.1717937184 - - PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Jatropha curcas]
3 Hb_000574_120 0.1739181023 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002760_060 0.1740643526 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
5 Hb_003442_050 0.1934237096 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
6 Hb_013057_030 0.1951999576 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002301_200 0.2072168674 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 12 [Jatropha curcas]
8 Hb_004324_290 0.2158318585 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
9 Hb_000172_300 0.2165467259 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
10 Hb_001277_150 0.2178203967 - - hypothetical protein VITISV_043492 [Vitis vinifera]
11 Hb_015978_030 0.2189619807 - - Zinc finger protein GIS2 [Medicago truncatula]
12 Hb_000142_010 0.219467458 - - PREDICTED: uncharacterized protein LOC105632779 [Jatropha curcas]
13 Hb_000316_150 0.2200617703 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
14 Hb_033153_010 0.2207823334 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
15 Hb_174829_040 0.2213879731 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
16 Hb_059580_010 0.2215564399 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
17 Hb_005081_060 0.2258140887 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]
18 Hb_047833_010 0.2261350186 - - Avr9/Cf-9 rapidly elicited protein [Jatropha curcas]
19 Hb_000318_460 0.2263614239 - - hypothetical protein CICLE_v10028333mg [Citrus clementina]
20 Hb_003086_050 0.2270899526 - - calcium-dependent protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005725_190 Hb_005725_190 Hb_000275_070 Hb_000275_070 Hb_005725_190--Hb_000275_070 Hb_000574_120 Hb_000574_120 Hb_005725_190--Hb_000574_120 Hb_002760_060 Hb_002760_060 Hb_005725_190--Hb_002760_060 Hb_003442_050 Hb_003442_050 Hb_005725_190--Hb_003442_050 Hb_013057_030 Hb_013057_030 Hb_005725_190--Hb_013057_030 Hb_002301_200 Hb_002301_200 Hb_005725_190--Hb_002301_200 Hb_000142_010 Hb_000142_010 Hb_000275_070--Hb_000142_010 Hb_000275_070--Hb_000574_120 Hb_000275_070--Hb_013057_030 Hb_007218_140 Hb_007218_140 Hb_000275_070--Hb_007218_140 Hb_000172_300 Hb_000172_300 Hb_000275_070--Hb_000172_300 Hb_004324_290 Hb_004324_290 Hb_000574_120--Hb_004324_290 Hb_000316_150 Hb_000316_150 Hb_000574_120--Hb_000316_150 Hb_000072_330 Hb_000072_330 Hb_000574_120--Hb_000072_330 Hb_004787_100 Hb_004787_100 Hb_000574_120--Hb_004787_100 Hb_000574_120--Hb_013057_030 Hb_033153_010 Hb_033153_010 Hb_002760_060--Hb_033153_010 Hb_000414_100 Hb_000414_100 Hb_002760_060--Hb_000414_100 Hb_174829_040 Hb_174829_040 Hb_002760_060--Hb_174829_040 Hb_001277_150 Hb_001277_150 Hb_002760_060--Hb_001277_150 Hb_001514_040 Hb_001514_040 Hb_002760_060--Hb_001514_040 Hb_011671_290 Hb_011671_290 Hb_002760_060--Hb_011671_290 Hb_003442_050--Hb_002760_060 Hb_003442_050--Hb_001514_040 Hb_000039_100 Hb_000039_100 Hb_003442_050--Hb_000039_100 Hb_003442_050--Hb_000172_300 Hb_005081_060 Hb_005081_060 Hb_003442_050--Hb_005081_060 Hb_048653_040 Hb_048653_040 Hb_003442_050--Hb_048653_040 Hb_002217_440 Hb_002217_440 Hb_013057_030--Hb_002217_440 Hb_013057_030--Hb_048653_040 Hb_048653_020 Hb_048653_020 Hb_013057_030--Hb_048653_020 Hb_013057_030--Hb_000172_300 Hb_116349_050 Hb_116349_050 Hb_013057_030--Hb_116349_050 Hb_003086_050 Hb_003086_050 Hb_013057_030--Hb_003086_050 Hb_002284_020 Hb_002284_020 Hb_002301_200--Hb_002284_020 Hb_000111_300 Hb_000111_300 Hb_002301_200--Hb_000111_300 Hb_143629_030 Hb_143629_030 Hb_002301_200--Hb_143629_030 Hb_002301_200--Hb_000574_120 Hb_000975_330 Hb_000975_330 Hb_002301_200--Hb_000975_330 Hb_065500_040 Hb_065500_040 Hb_002301_200--Hb_065500_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.205515 16.165 0.51272 0.565044 0 0.159852
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.59204 0.179657 0.75036 0.19824

CAGE analysis