Hb_007747_040

Information

Type -
Description -
Location Contig7747: 32054-42731
Sequence    

Annotation

kegg
ID rcu:RCOM_1259290
description o-linked n-acetylglucosamine transferase, ogt, putative
nr
ID XP_012074406.1
description PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Jatropha curcas]
swissprot
ID O82039
description Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Petunia hybrida GN=SPY PE=2 SV=1
trembl
ID A0A067KMI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08837 PE=4 SV=1
Gene Ontology
ID GO:0005829
description probable udp-n-acetylglucosamine--peptide n-acetylglucosaminyltransferase spindly

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57736: 31995-42712
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007747_040 0.0 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Jatropha curcas]
2 Hb_002732_040 0.052805163 - - PREDICTED: uncharacterized protein LOC105628163 isoform X1 [Jatropha curcas]
3 Hb_002205_250 0.0581713224 - - PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Jatropha curcas]
4 Hb_020378_030 0.0597433063 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
5 Hb_001814_030 0.0616640821 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
6 Hb_001268_280 0.0672236082 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001946_340 0.0681773836 - - PREDICTED: mediator of RNA polymerase II transcription subunit 17-like isoform X1 [Jatropha curcas]
8 Hb_000590_050 0.0681940049 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]
9 Hb_000343_250 0.0693903616 - - PREDICTED: protein CASC3 [Jatropha curcas]
10 Hb_001716_020 0.0708836819 - - hydrolase, putative [Ricinus communis]
11 Hb_105105_010 0.0711429269 - - PREDICTED: coiled-coil domain-containing protein 132 [Jatropha curcas]
12 Hb_004586_220 0.0720377368 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
13 Hb_000614_210 0.0722075593 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-1-like isoform X1 [Jatropha curcas]
14 Hb_000890_060 0.0732465847 - - PREDICTED: sucrose nonfermenting 4-like protein [Jatropha curcas]
15 Hb_006501_090 0.073304019 - - PREDICTED: golgin candidate 1 [Jatropha curcas]
16 Hb_002218_090 0.0737883272 - - Poly(rC)-binding protein, putative [Ricinus communis]
17 Hb_008406_200 0.0740800659 transcription factor TF Family: SNF2 conserved hypothetical protein [Ricinus communis]
18 Hb_000684_250 0.0744598229 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
19 Hb_001767_140 0.0746147388 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]
20 Hb_000243_210 0.0746534495 - - protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_007747_040 Hb_007747_040 Hb_002732_040 Hb_002732_040 Hb_007747_040--Hb_002732_040 Hb_002205_250 Hb_002205_250 Hb_007747_040--Hb_002205_250 Hb_020378_030 Hb_020378_030 Hb_007747_040--Hb_020378_030 Hb_001814_030 Hb_001814_030 Hb_007747_040--Hb_001814_030 Hb_001268_280 Hb_001268_280 Hb_007747_040--Hb_001268_280 Hb_001946_340 Hb_001946_340 Hb_007747_040--Hb_001946_340 Hb_000343_250 Hb_000343_250 Hb_002732_040--Hb_000343_250 Hb_000462_060 Hb_000462_060 Hb_002732_040--Hb_000462_060 Hb_002732_040--Hb_020378_030 Hb_000866_460 Hb_000866_460 Hb_002732_040--Hb_000866_460 Hb_000327_270 Hb_000327_270 Hb_002732_040--Hb_000327_270 Hb_105105_010 Hb_105105_010 Hb_002205_250--Hb_105105_010 Hb_003835_070 Hb_003835_070 Hb_002205_250--Hb_003835_070 Hb_000614_210 Hb_000614_210 Hb_002205_250--Hb_000614_210 Hb_002205_250--Hb_001814_030 Hb_001716_020 Hb_001716_020 Hb_002205_250--Hb_001716_020 Hb_000243_210 Hb_000243_210 Hb_002205_250--Hb_000243_210 Hb_004586_220 Hb_004586_220 Hb_020378_030--Hb_004586_220 Hb_000590_050 Hb_000590_050 Hb_020378_030--Hb_000590_050 Hb_000441_220 Hb_000441_220 Hb_020378_030--Hb_000441_220 Hb_020378_030--Hb_001814_030 Hb_000592_030 Hb_000592_030 Hb_020378_030--Hb_000592_030 Hb_001814_030--Hb_004586_220 Hb_001814_030--Hb_000614_210 Hb_012395_140 Hb_012395_140 Hb_001814_030--Hb_012395_140 Hb_159558_010 Hb_159558_010 Hb_001814_030--Hb_159558_010 Hb_000914_120 Hb_000914_120 Hb_001268_280--Hb_000914_120 Hb_002267_140 Hb_002267_140 Hb_001268_280--Hb_002267_140 Hb_000162_030 Hb_000162_030 Hb_001268_280--Hb_000162_030 Hb_001318_070 Hb_001318_070 Hb_001268_280--Hb_001318_070 Hb_001268_280--Hb_002732_040 Hb_001268_280--Hb_000243_210 Hb_003943_010 Hb_003943_010 Hb_001946_340--Hb_003943_010 Hb_007123_030 Hb_007123_030 Hb_001946_340--Hb_007123_030 Hb_004935_030 Hb_004935_030 Hb_001946_340--Hb_004935_030 Hb_001767_140 Hb_001767_140 Hb_001946_340--Hb_001767_140 Hb_001377_160 Hb_001377_160 Hb_001946_340--Hb_001377_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.8405 17.936 14.4812 13.1587 13.0753 21.3618
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.672 10.117 13.0126 14.01 16.167

CAGE analysis