Hb_007101_250

Information

Type -
Description -
Location Contig7101: 134717-136770
Sequence    

Annotation

kegg
ID rcu:RCOM_0699910
description IAA-amino acid hydrolase ILR1 precursor, putative (EC:3.5.1.32)
nr
ID XP_012092031.1
description PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
swissprot
ID O04373
description IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2
trembl
ID A0A067JMR4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21766 PE=4 SV=1
Gene Ontology
ID GO:0047980
description iaa-amino acid hydrolase ilr1-like 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55262: 134611-136767
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007101_250 0.0 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
2 Hb_000574_270 0.1298069596 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
3 Hb_000483_050 0.1344129533 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
4 Hb_000365_110 0.13823222 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
5 Hb_150745_010 0.1457096512 - - hypothetical protein JCGZ_17337 [Jatropha curcas]
6 Hb_000142_030 0.1471032601 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
7 Hb_008878_010 0.1503497893 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 2-like [Populus euphratica]
8 Hb_001143_200 0.1521013314 transcription factor TF Family: NAC NAC domain protein [Glycine max]
9 Hb_004551_010 0.1534052411 - - tryptophan synthase beta chain, putative [Ricinus communis]
10 Hb_000042_020 0.1534181437 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
11 Hb_008115_030 0.1554077607 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
12 Hb_000413_220 0.1574371757 - - PREDICTED: kinesin-1 [Jatropha curcas]
13 Hb_007441_290 0.1633889719 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
14 Hb_000340_070 0.1637461216 - - PREDICTED: CSC1-like protein At4g02900 [Jatropha curcas]
15 Hb_000953_180 0.1644635663 - - -
16 Hb_000656_120 0.1646500773 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]
17 Hb_004650_040 0.1647295635 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105638892 [Jatropha curcas]
18 Hb_000574_180 0.1663647932 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
19 Hb_031266_020 0.167690646 - - PREDICTED: calcineurin B-like protein 9 isoform X1 [Jatropha curcas]
20 Hb_002200_020 0.1692593134 transcription factor TF Family: C2C2-Dof hypothetical protein RCOM_0137680 [Ricinus communis]

Gene co-expression network

sample Hb_007101_250 Hb_007101_250 Hb_000574_270 Hb_000574_270 Hb_007101_250--Hb_000574_270 Hb_000483_050 Hb_000483_050 Hb_007101_250--Hb_000483_050 Hb_000365_110 Hb_000365_110 Hb_007101_250--Hb_000365_110 Hb_150745_010 Hb_150745_010 Hb_007101_250--Hb_150745_010 Hb_000142_030 Hb_000142_030 Hb_007101_250--Hb_000142_030 Hb_008878_010 Hb_008878_010 Hb_007101_250--Hb_008878_010 Hb_000574_270--Hb_000365_110 Hb_000953_180 Hb_000953_180 Hb_000574_270--Hb_000953_180 Hb_000574_270--Hb_000483_050 Hb_000574_270--Hb_150745_010 Hb_000192_030 Hb_000192_030 Hb_000574_270--Hb_000192_030 Hb_000413_220 Hb_000413_220 Hb_000574_270--Hb_000413_220 Hb_000483_050--Hb_000365_110 Hb_001971_030 Hb_001971_030 Hb_000483_050--Hb_001971_030 Hb_000656_120 Hb_000656_120 Hb_000483_050--Hb_000656_120 Hb_000483_050--Hb_150745_010 Hb_000483_050--Hb_000953_180 Hb_000365_110--Hb_000953_180 Hb_100395_010 Hb_100395_010 Hb_000365_110--Hb_100395_010 Hb_000365_110--Hb_000192_030 Hb_008948_070 Hb_008948_070 Hb_000365_110--Hb_008948_070 Hb_001754_100 Hb_001754_100 Hb_150745_010--Hb_001754_100 Hb_150745_010--Hb_000413_220 Hb_000574_180 Hb_000574_180 Hb_150745_010--Hb_000574_180 Hb_000397_170 Hb_000397_170 Hb_150745_010--Hb_000397_170 Hb_003599_060 Hb_003599_060 Hb_000142_030--Hb_003599_060 Hb_114292_010 Hb_114292_010 Hb_000142_030--Hb_114292_010 Hb_007441_290 Hb_007441_290 Hb_000142_030--Hb_007441_290 Hb_012753_150 Hb_012753_150 Hb_000142_030--Hb_012753_150 Hb_001277_120 Hb_001277_120 Hb_000142_030--Hb_001277_120 Hb_001143_200 Hb_001143_200 Hb_000142_030--Hb_001143_200 Hb_001007_090 Hb_001007_090 Hb_008878_010--Hb_001007_090 Hb_031266_020 Hb_031266_020 Hb_008878_010--Hb_031266_020 Hb_008878_010--Hb_003599_060 Hb_004551_010 Hb_004551_010 Hb_008878_010--Hb_004551_010 Hb_000215_150 Hb_000215_150 Hb_008878_010--Hb_000215_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 27.787 111.62 22.7921 0 0.0246967
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.180183 1.5357 1.91117 8.8796 1.68288

CAGE analysis