Hb_006829_050

Information

Type -
Description -
Location Contig6829: 33582-35807
Sequence    

Annotation

kegg
ID rcu:RCOM_0586570
description receptor serine-threonine protein kinase, putative (EC:2.7.10.2)
nr
ID XP_002522988.1
description receptor serine-threonine protein kinase, putative [Ricinus communis]
swissprot
ID Q9FE20
description Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1
trembl
ID B9SAG9
description Receptor serine-threonine protein kinase, putative OS=Ricinus communis GN=RCOM_0586570 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase pbs1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006829_050 0.0 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
2 Hb_058325_010 0.2258256179 - - Disease resistance protein RFL1, putative [Ricinus communis]
3 Hb_001248_110 0.2369538646 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
4 Hb_000960_070 0.2497488939 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
5 Hb_000792_060 0.2501053692 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000544_020 0.2518435411 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
7 Hb_004648_100 0.2607394605 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]
8 Hb_007253_040 0.2613794353 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]
9 Hb_169620_010 0.2615866384 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
10 Hb_066320_010 0.2654612775 - - hypothetical protein VITISV_027639 [Vitis vinifera]
11 Hb_000450_180 0.2670306794 - - Disease resistance protein RPS5, putative [Ricinus communis]
12 Hb_001486_150 0.2672306939 - - -
13 Hb_000984_100 0.2674350721 - - receptor protein kinase, putative [Ricinus communis]
14 Hb_007259_020 0.2693103348 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Jatropha curcas]
15 Hb_000069_090 0.2746844649 - - neutral/alkaline invertase [Manihot esculenta]
16 Hb_081686_030 0.2764471675 - - hypothetical protein MIMGU_mgv11b016770mg [Erythranthe guttata]
17 Hb_000825_040 0.2808276819 - - catalytic, putative [Ricinus communis]
18 Hb_002890_060 0.2837213895 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
19 Hb_001251_070 0.2849392255 - - PREDICTED: probable aldo-keto reductase 2, partial [Populus euphratica]
20 Hb_000532_130 0.2867242217 - - hypothetical protein [Anabaena sp. PCC 7108]

Gene co-expression network

sample Hb_006829_050 Hb_006829_050 Hb_058325_010 Hb_058325_010 Hb_006829_050--Hb_058325_010 Hb_001248_110 Hb_001248_110 Hb_006829_050--Hb_001248_110 Hb_000960_070 Hb_000960_070 Hb_006829_050--Hb_000960_070 Hb_000792_060 Hb_000792_060 Hb_006829_050--Hb_000792_060 Hb_000544_020 Hb_000544_020 Hb_006829_050--Hb_000544_020 Hb_004648_100 Hb_004648_100 Hb_006829_050--Hb_004648_100 Hb_081686_030 Hb_081686_030 Hb_058325_010--Hb_081686_030 Hb_169620_010 Hb_169620_010 Hb_058325_010--Hb_169620_010 Hb_043939_010 Hb_043939_010 Hb_058325_010--Hb_043939_010 Hb_000172_010 Hb_000172_010 Hb_058325_010--Hb_000172_010 Hb_003371_260 Hb_003371_260 Hb_058325_010--Hb_003371_260 Hb_000984_100 Hb_000984_100 Hb_058325_010--Hb_000984_100 Hb_004466_070 Hb_004466_070 Hb_001248_110--Hb_004466_070 Hb_001248_110--Hb_000544_020 Hb_000566_190 Hb_000566_190 Hb_001248_110--Hb_000566_190 Hb_001608_030 Hb_001608_030 Hb_001248_110--Hb_001608_030 Hb_042553_010 Hb_042553_010 Hb_001248_110--Hb_042553_010 Hb_158696_010 Hb_158696_010 Hb_001248_110--Hb_158696_010 Hb_000069_090 Hb_000069_090 Hb_000960_070--Hb_000069_090 Hb_001486_150 Hb_001486_150 Hb_000960_070--Hb_001486_150 Hb_001437_020 Hb_001437_020 Hb_000960_070--Hb_001437_020 Hb_000625_110 Hb_000625_110 Hb_000960_070--Hb_000625_110 Hb_000825_040 Hb_000825_040 Hb_000960_070--Hb_000825_040 Hb_001251_070 Hb_001251_070 Hb_000792_060--Hb_001251_070 Hb_000088_160 Hb_000088_160 Hb_000792_060--Hb_000088_160 Hb_007618_010 Hb_007618_010 Hb_000792_060--Hb_007618_010 Hb_020581_040 Hb_020581_040 Hb_000792_060--Hb_020581_040 Hb_007163_140 Hb_007163_140 Hb_000792_060--Hb_007163_140 Hb_007253_040 Hb_007253_040 Hb_000792_060--Hb_007253_040 Hb_060909_010 Hb_060909_010 Hb_000544_020--Hb_060909_010 Hb_000544_020--Hb_158696_010 Hb_000544_020--Hb_000984_100 Hb_000544_020--Hb_004648_100 Hb_000532_130 Hb_000532_130 Hb_000544_020--Hb_000532_130 Hb_004648_100--Hb_060909_010 Hb_004648_100--Hb_169620_010 Hb_057079_020 Hb_057079_020 Hb_004648_100--Hb_057079_020 Hb_001410_010 Hb_001410_010 Hb_004648_100--Hb_001410_010 Hb_011310_200 Hb_011310_200 Hb_004648_100--Hb_011310_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.537069 0.0138373 0.0822202 0 0.1286
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0315363 0 0.101046 0.065302

CAGE analysis