Hb_001251_070

Information

Type -
Description -
Location Contig1251: 97234-103297
Sequence    

Annotation

kegg
ID vvi:100251429
description probable aldo-keto reductase 2
nr
ID XP_011042806.1
description PREDICTED: probable aldo-keto reductase 2, partial [Populus euphratica]
swissprot
ID Q06494
description Putative pyridoxal reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR127W PE=1 SV=1
trembl
ID A5C8G1
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033356 PE=4 SV=1
Gene Ontology
ID GO:0050236
description probable aldo-keto reductase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07690: 97435-98031
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001251_070 0.0 - - PREDICTED: probable aldo-keto reductase 2, partial [Populus euphratica]
2 Hb_000792_060 0.1694972939 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007253_040 0.1787404062 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]
4 Hb_000589_130 0.2052928426 desease resistance Gene Name: NB-ARC unnamed protein product [Vitis vinifera]
5 Hb_010605_010 0.2086293799 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
6 Hb_000450_180 0.2140493214 - - Disease resistance protein RPS5, putative [Ricinus communis]
7 Hb_029393_020 0.2214807081 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 12-like [Jatropha curcas]
8 Hb_007618_010 0.2258615459 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
9 Hb_000101_300 0.2269346085 desease resistance Gene Name: NB-ARC hypothetical protein B456_002G046500, partial [Gossypium raimondii]
10 Hb_151706_010 0.2278389719 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
11 Hb_060909_010 0.2280343905 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
12 Hb_163658_010 0.2301851137 - - Disease resistance protein RPS5, putative [Ricinus communis]
13 Hb_007259_020 0.231733852 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Jatropha curcas]
14 Hb_136880_010 0.236295589 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
15 Hb_008226_100 0.2403382763 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
16 Hb_006913_050 0.2407303213 - - -
17 Hb_169620_010 0.2423821833 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
18 Hb_000532_130 0.2478471448 - - hypothetical protein [Anabaena sp. PCC 7108]
19 Hb_004648_100 0.2482566096 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]
20 Hb_159411_010 0.2514326996 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]

Gene co-expression network

sample Hb_001251_070 Hb_001251_070 Hb_000792_060 Hb_000792_060 Hb_001251_070--Hb_000792_060 Hb_007253_040 Hb_007253_040 Hb_001251_070--Hb_007253_040 Hb_000589_130 Hb_000589_130 Hb_001251_070--Hb_000589_130 Hb_010605_010 Hb_010605_010 Hb_001251_070--Hb_010605_010 Hb_000450_180 Hb_000450_180 Hb_001251_070--Hb_000450_180 Hb_029393_020 Hb_029393_020 Hb_001251_070--Hb_029393_020 Hb_000088_160 Hb_000088_160 Hb_000792_060--Hb_000088_160 Hb_007618_010 Hb_007618_010 Hb_000792_060--Hb_007618_010 Hb_020581_040 Hb_020581_040 Hb_000792_060--Hb_020581_040 Hb_007163_140 Hb_007163_140 Hb_000792_060--Hb_007163_140 Hb_000792_060--Hb_007253_040 Hb_000532_130 Hb_000532_130 Hb_007253_040--Hb_000532_130 Hb_007259_020 Hb_007259_020 Hb_007253_040--Hb_007259_020 Hb_008175_030 Hb_008175_030 Hb_007253_040--Hb_008175_030 Hb_060909_010 Hb_060909_010 Hb_007253_040--Hb_060909_010 Hb_008226_100 Hb_008226_100 Hb_007253_040--Hb_008226_100 Hb_007253_040--Hb_007618_010 Hb_000022_180 Hb_000022_180 Hb_000589_130--Hb_000022_180 Hb_004648_100 Hb_004648_100 Hb_000589_130--Hb_004648_100 Hb_000589_130--Hb_029393_020 Hb_005147_040 Hb_005147_040 Hb_000589_130--Hb_005147_040 Hb_000589_130--Hb_060909_010 Hb_000197_230 Hb_000197_230 Hb_010605_010--Hb_000197_230 Hb_002119_070 Hb_002119_070 Hb_010605_010--Hb_002119_070 Hb_163658_010 Hb_163658_010 Hb_010605_010--Hb_163658_010 Hb_001408_150 Hb_001408_150 Hb_010605_010--Hb_001408_150 Hb_001071_060 Hb_001071_060 Hb_010605_010--Hb_001071_060 Hb_001391_100 Hb_001391_100 Hb_010605_010--Hb_001391_100 Hb_000450_180--Hb_004648_100 Hb_062229_010 Hb_062229_010 Hb_000450_180--Hb_062229_010 Hb_000450_180--Hb_007253_040 Hb_057079_020 Hb_057079_020 Hb_000450_180--Hb_057079_020 Hb_117840_010 Hb_117840_010 Hb_000450_180--Hb_117840_010 Hb_000544_020 Hb_000544_020 Hb_000450_180--Hb_000544_020 Hb_147996_010 Hb_147996_010 Hb_029393_020--Hb_147996_010 Hb_006615_040 Hb_006615_040 Hb_029393_020--Hb_006615_040 Hb_000566_190 Hb_000566_190 Hb_029393_020--Hb_000566_190 Hb_029393_020--Hb_007253_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.679147 27.8735 5.55827 7.60506 0.603564 18.1411
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0955199 0.100196 0.0470316 19.9219 8.5358

CAGE analysis