Hb_163658_010

Information

Type -
Description -
Location Contig163658: 11-702
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance gene nbs-lrr family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_163658_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_060909_010 0.1417424869 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
3 Hb_010605_010 0.1458897037 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
4 Hb_169620_010 0.1493104905 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
5 Hb_000544_020 0.1645547548 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
6 Hb_004648_100 0.1675037593 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]
7 Hb_001408_150 0.1714534467 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
8 Hb_000532_130 0.1801703063 - - hypothetical protein [Anabaena sp. PCC 7108]
9 Hb_001391_100 0.1827451859 - - AMP dependent ligase, putative [Ricinus communis]
10 Hb_062229_010 0.188416153 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
11 Hb_136880_010 0.19086017 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
12 Hb_043939_010 0.1927583241 - - hypothetical protein B456_N011100 [Gossypium raimondii]
13 Hb_000233_100 0.1947864965 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
14 Hb_002739_060 0.1962095905 - - -
15 Hb_000778_020 0.1972760917 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
16 Hb_001373_010 0.1974261618 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
17 Hb_057079_020 0.2061024309 - - conserved hypothetical protein [Ricinus communis]
18 Hb_008175_030 0.2107211671 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Jatropha curcas]
19 Hb_000197_230 0.2110523416 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
20 Hb_007253_040 0.211698141 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_163658_010 Hb_163658_010 Hb_060909_010 Hb_060909_010 Hb_163658_010--Hb_060909_010 Hb_010605_010 Hb_010605_010 Hb_163658_010--Hb_010605_010 Hb_169620_010 Hb_169620_010 Hb_163658_010--Hb_169620_010 Hb_000544_020 Hb_000544_020 Hb_163658_010--Hb_000544_020 Hb_004648_100 Hb_004648_100 Hb_163658_010--Hb_004648_100 Hb_001408_150 Hb_001408_150 Hb_163658_010--Hb_001408_150 Hb_060909_010--Hb_001408_150 Hb_060909_010--Hb_000544_020 Hb_000233_100 Hb_000233_100 Hb_060909_010--Hb_000233_100 Hb_060909_010--Hb_004648_100 Hb_008226_100 Hb_008226_100 Hb_060909_010--Hb_008226_100 Hb_000532_130 Hb_000532_130 Hb_060909_010--Hb_000532_130 Hb_000197_230 Hb_000197_230 Hb_010605_010--Hb_000197_230 Hb_002119_070 Hb_002119_070 Hb_010605_010--Hb_002119_070 Hb_010605_010--Hb_001408_150 Hb_001071_060 Hb_001071_060 Hb_010605_010--Hb_001071_060 Hb_001391_100 Hb_001391_100 Hb_010605_010--Hb_001391_100 Hb_169620_010--Hb_004648_100 Hb_066320_010 Hb_066320_010 Hb_169620_010--Hb_066320_010 Hb_169620_010--Hb_060909_010 Hb_169620_010--Hb_000544_020 Hb_169620_010--Hb_001408_150 Hb_158696_010 Hb_158696_010 Hb_000544_020--Hb_158696_010 Hb_000984_100 Hb_000984_100 Hb_000544_020--Hb_000984_100 Hb_000544_020--Hb_004648_100 Hb_001248_110 Hb_001248_110 Hb_000544_020--Hb_001248_110 Hb_000544_020--Hb_000532_130 Hb_057079_020 Hb_057079_020 Hb_004648_100--Hb_057079_020 Hb_001410_010 Hb_001410_010 Hb_004648_100--Hb_001410_010 Hb_011310_200 Hb_011310_200 Hb_004648_100--Hb_011310_200 Hb_000778_020 Hb_000778_020 Hb_001408_150--Hb_000778_020 Hb_008175_030 Hb_008175_030 Hb_001408_150--Hb_008175_030 Hb_002739_060 Hb_002739_060 Hb_001408_150--Hb_002739_060 Hb_001408_150--Hb_000532_130 Hb_001408_150--Hb_000197_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.708498 5.26832 0.492593 2.06005 0 1.30367
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.287196 2.64048 1.58839

CAGE analysis