Hb_020581_040

Information

Type -
Description -
Location Contig20581: 69896-70720
Sequence    

Annotation

kegg
ID tcc:TCM_040445
description Receptor-like protein kinase 1
nr
ID XP_011083772.1
description PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X3 [Sesamum indicum]
swissprot
ID P93756
description G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 OS=Arabidopsis thaliana GN=SD31 PE=3 SV=1
trembl
ID A0A072VEN2
description Adenine nucleotide alpha hydrolase-like domain kinase OS=Medicago truncatula GN=MTR_1g021570 PE=4 SV=1
Gene Ontology
ID GO:0000166
description proline-rich receptor-like protein kinase perk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21216: 51942-95174
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020581_040 0.0 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X3 [Sesamum indicum]
2 Hb_003469_010 0.1498536045 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
3 Hb_020581_050 0.1915722651 - - -
4 Hb_002555_020 0.2019892506 - - Receptor-like protein kinase [Medicago truncatula]
5 Hb_169388_010 0.2033747378 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_000792_060 0.2082223245 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000088_160 0.2100420288 - - PREDICTED: uncharacterized protein LOC105629775 [Jatropha curcas]
8 Hb_001454_160 0.2145088219 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]
9 Hb_011174_100 0.2175877309 - - ubiquitin-protein ligase, putative [Ricinus communis]
10 Hb_004195_190 0.2184956573 - - WD-repeat protein, putative [Ricinus communis]
11 Hb_018563_040 0.219834014 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_052186_010 0.2236275524 - - hypothetical protein JCGZ_17055 [Jatropha curcas]
13 Hb_151364_010 0.2267015401 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
14 Hb_000521_300 0.2305059146 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
15 Hb_001761_040 0.2316069347 - - PREDICTED: beta-amyrin synthase-like [Jatropha curcas]
16 Hb_001864_010 0.2316466909 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005489_160 0.2329459098 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
18 Hb_017987_080 0.2366735616 - - Uncharacterized protein TCM_001832 [Theobroma cacao]
19 Hb_005542_110 0.2374988321 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
20 Hb_004055_100 0.2388019552 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]

Gene co-expression network

sample Hb_020581_040 Hb_020581_040 Hb_003469_010 Hb_003469_010 Hb_020581_040--Hb_003469_010 Hb_020581_050 Hb_020581_050 Hb_020581_040--Hb_020581_050 Hb_002555_020 Hb_002555_020 Hb_020581_040--Hb_002555_020 Hb_169388_010 Hb_169388_010 Hb_020581_040--Hb_169388_010 Hb_000792_060 Hb_000792_060 Hb_020581_040--Hb_000792_060 Hb_000088_160 Hb_000088_160 Hb_020581_040--Hb_000088_160 Hb_004055_100 Hb_004055_100 Hb_003469_010--Hb_004055_100 Hb_005542_110 Hb_005542_110 Hb_003469_010--Hb_005542_110 Hb_022108_010 Hb_022108_010 Hb_003469_010--Hb_022108_010 Hb_001454_160 Hb_001454_160 Hb_003469_010--Hb_001454_160 Hb_011174_100 Hb_011174_100 Hb_003469_010--Hb_011174_100 Hb_011552_020 Hb_011552_020 Hb_020581_050--Hb_011552_020 Hb_108884_020 Hb_108884_020 Hb_020581_050--Hb_108884_020 Hb_006475_020 Hb_006475_020 Hb_020581_050--Hb_006475_020 Hb_001864_010 Hb_001864_010 Hb_020581_050--Hb_001864_010 Hb_029508_030 Hb_029508_030 Hb_020581_050--Hb_029508_030 Hb_000286_190 Hb_000286_190 Hb_020581_050--Hb_000286_190 Hb_002555_020--Hb_001454_160 Hb_018563_040 Hb_018563_040 Hb_002555_020--Hb_018563_040 Hb_004195_190 Hb_004195_190 Hb_002555_020--Hb_004195_190 Hb_000976_060 Hb_000976_060 Hb_002555_020--Hb_000976_060 Hb_001489_030 Hb_001489_030 Hb_002555_020--Hb_001489_030 Hb_002555_020--Hb_005542_110 Hb_169388_010--Hb_018563_040 Hb_003385_090 Hb_003385_090 Hb_169388_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_169388_010--Hb_032651_060 Hb_004619_010 Hb_004619_010 Hb_169388_010--Hb_004619_010 Hb_001363_010 Hb_001363_010 Hb_169388_010--Hb_001363_010 Hb_169388_010--Hb_001454_160 Hb_001251_070 Hb_001251_070 Hb_000792_060--Hb_001251_070 Hb_000792_060--Hb_000088_160 Hb_007618_010 Hb_007618_010 Hb_000792_060--Hb_007618_010 Hb_007163_140 Hb_007163_140 Hb_000792_060--Hb_007163_140 Hb_007253_040 Hb_007253_040 Hb_000792_060--Hb_007253_040 Hb_000521_300 Hb_000521_300 Hb_000088_160--Hb_000521_300 Hb_000088_160--Hb_007618_010 Hb_133636_010 Hb_133636_010 Hb_000088_160--Hb_133636_010 Hb_002783_320 Hb_002783_320 Hb_000088_160--Hb_002783_320 Hb_001454_340 Hb_001454_340 Hb_000088_160--Hb_001454_340 Hb_164010_090 Hb_164010_090 Hb_000088_160--Hb_164010_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0487899 16.2772 0 0.42861 0 2.09281
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.9267 2.72842

CAGE analysis