Hb_006475_020

Information

Type -
Description -
Location Contig6475: 5706-6210
Sequence    

Annotation

kegg
ID rcu:RCOM_0503990
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_012087780.1
description PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
swissprot
ID Q9FG33
description Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1
trembl
ID A0A067JYM5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25550 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable l-type lectin-domain containing receptor kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006475_020 0.0 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
2 Hb_044313_010 0.0751789162 - - conserved hypothetical protein [Ricinus communis]
3 Hb_011552_020 0.1289843563 - - hypothetical protein F383_28301 [Gossypium arboreum]
4 Hb_020581_050 0.1644667786 - - -
5 Hb_002142_010 0.1676491486 - - conserved hypothetical protein [Ricinus communis]
6 Hb_032299_070 0.169942646 - - -
7 Hb_018212_020 0.1746899477 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
8 Hb_108884_020 0.1803159492 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
9 Hb_006326_030 0.1811414817 - - conserved hypothetical protein [Ricinus communis]
10 Hb_151694_010 0.1887038127 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
11 Hb_010813_030 0.1897919433 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
12 Hb_000177_120 0.1907769408 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
13 Hb_002997_050 0.1931111153 - - PREDICTED: receptor-like protein 12 isoform X4 [Populus euphratica]
14 Hb_002555_030 0.1939267084 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
15 Hb_052186_010 0.1950727323 - - hypothetical protein JCGZ_17055 [Jatropha curcas]
16 Hb_137695_010 0.1969395664 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
17 Hb_000959_370 0.2008012304 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
18 Hb_019641_020 0.2018050016 - - hypothetical protein AALP_AAs49670U000100, partial [Arabis alpina]
19 Hb_000512_040 0.2121070291 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
20 Hb_000608_450 0.2147474581 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]

Gene co-expression network

sample Hb_006475_020 Hb_006475_020 Hb_044313_010 Hb_044313_010 Hb_006475_020--Hb_044313_010 Hb_011552_020 Hb_011552_020 Hb_006475_020--Hb_011552_020 Hb_020581_050 Hb_020581_050 Hb_006475_020--Hb_020581_050 Hb_002142_010 Hb_002142_010 Hb_006475_020--Hb_002142_010 Hb_032299_070 Hb_032299_070 Hb_006475_020--Hb_032299_070 Hb_018212_020 Hb_018212_020 Hb_006475_020--Hb_018212_020 Hb_044313_010--Hb_002142_010 Hb_044313_010--Hb_032299_070 Hb_000959_370 Hb_000959_370 Hb_044313_010--Hb_000959_370 Hb_151694_010 Hb_151694_010 Hb_044313_010--Hb_151694_010 Hb_028872_040 Hb_028872_040 Hb_044313_010--Hb_028872_040 Hb_052186_010 Hb_052186_010 Hb_011552_020--Hb_052186_010 Hb_108884_020 Hb_108884_020 Hb_011552_020--Hb_108884_020 Hb_011552_020--Hb_020581_050 Hb_001864_010 Hb_001864_010 Hb_011552_020--Hb_001864_010 Hb_005436_020 Hb_005436_020 Hb_011552_020--Hb_005436_020 Hb_020581_050--Hb_108884_020 Hb_020581_050--Hb_001864_010 Hb_029508_030 Hb_029508_030 Hb_020581_050--Hb_029508_030 Hb_000286_190 Hb_000286_190 Hb_020581_050--Hb_000286_190 Hb_002142_010--Hb_151694_010 Hb_007709_020 Hb_007709_020 Hb_002142_010--Hb_007709_020 Hb_002142_010--Hb_028872_040 Hb_138667_010 Hb_138667_010 Hb_002142_010--Hb_138667_010 Hb_000280_120 Hb_000280_120 Hb_002142_010--Hb_000280_120 Hb_032299_070--Hb_000959_370 Hb_005618_110 Hb_005618_110 Hb_032299_070--Hb_005618_110 Hb_032299_070--Hb_002142_010 Hb_006013_030 Hb_006013_030 Hb_032299_070--Hb_006013_030 Hb_011242_070 Hb_011242_070 Hb_032299_070--Hb_011242_070 Hb_010813_030 Hb_010813_030 Hb_018212_020--Hb_010813_030 Hb_000254_150 Hb_000254_150 Hb_018212_020--Hb_000254_150 Hb_132515_010 Hb_132515_010 Hb_018212_020--Hb_132515_010 Hb_006326_030 Hb_006326_030 Hb_018212_020--Hb_006326_030 Hb_006569_110 Hb_006569_110 Hb_018212_020--Hb_006569_110 Hb_002997_050 Hb_002997_050 Hb_018212_020--Hb_002997_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.408366 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.753708 0.279533

CAGE analysis