Hb_044313_010

Information

Type -
Description -
Location Contig44313: 12-404
Sequence    

Annotation

kegg
ID rcu:RCOM_0885120
description hypothetical protein
nr
ID XP_002522633.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0885120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044313_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_006475_020 0.0751789162 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
3 Hb_002142_010 0.1077477339 - - conserved hypothetical protein [Ricinus communis]
4 Hb_032299_070 0.1223860818 - - -
5 Hb_000959_370 0.14027523 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
6 Hb_151694_010 0.146767487 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
7 Hb_028872_040 0.1627045713 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_019641_020 0.1652641569 - - hypothetical protein AALP_AAs49670U000100, partial [Arabis alpina]
9 Hb_006013_030 0.1667095909 - - -
10 Hb_002997_050 0.168156308 - - PREDICTED: receptor-like protein 12 isoform X4 [Populus euphratica]
11 Hb_007709_020 0.1770173928 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
12 Hb_018212_020 0.1801857548 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
13 Hb_010813_030 0.182503351 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
14 Hb_000280_120 0.1919483856 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
15 Hb_138667_010 0.1949511325 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
16 Hb_011552_020 0.1956386552 - - hypothetical protein F383_28301 [Gossypium arboreum]
17 Hb_006326_030 0.1989140319 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002555_030 0.2031939074 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
19 Hb_005618_110 0.2050865011 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_020581_050 0.2072454784 - - -

Gene co-expression network

sample Hb_044313_010 Hb_044313_010 Hb_006475_020 Hb_006475_020 Hb_044313_010--Hb_006475_020 Hb_002142_010 Hb_002142_010 Hb_044313_010--Hb_002142_010 Hb_032299_070 Hb_032299_070 Hb_044313_010--Hb_032299_070 Hb_000959_370 Hb_000959_370 Hb_044313_010--Hb_000959_370 Hb_151694_010 Hb_151694_010 Hb_044313_010--Hb_151694_010 Hb_028872_040 Hb_028872_040 Hb_044313_010--Hb_028872_040 Hb_011552_020 Hb_011552_020 Hb_006475_020--Hb_011552_020 Hb_020581_050 Hb_020581_050 Hb_006475_020--Hb_020581_050 Hb_006475_020--Hb_002142_010 Hb_006475_020--Hb_032299_070 Hb_018212_020 Hb_018212_020 Hb_006475_020--Hb_018212_020 Hb_002142_010--Hb_151694_010 Hb_007709_020 Hb_007709_020 Hb_002142_010--Hb_007709_020 Hb_002142_010--Hb_028872_040 Hb_138667_010 Hb_138667_010 Hb_002142_010--Hb_138667_010 Hb_000280_120 Hb_000280_120 Hb_002142_010--Hb_000280_120 Hb_032299_070--Hb_000959_370 Hb_005618_110 Hb_005618_110 Hb_032299_070--Hb_005618_110 Hb_032299_070--Hb_002142_010 Hb_006013_030 Hb_006013_030 Hb_032299_070--Hb_006013_030 Hb_011242_070 Hb_011242_070 Hb_032299_070--Hb_011242_070 Hb_000959_370--Hb_006013_030 Hb_002733_050 Hb_002733_050 Hb_000959_370--Hb_002733_050 Hb_000600_080 Hb_000600_080 Hb_000959_370--Hb_000600_080 Hb_000959_370--Hb_000280_120 Hb_072173_010 Hb_072173_010 Hb_000959_370--Hb_072173_010 Hb_151694_010--Hb_007709_020 Hb_151694_010--Hb_028872_040 Hb_151694_010--Hb_138667_010 Hb_004021_120 Hb_004021_120 Hb_151694_010--Hb_004021_120 Hb_028872_040--Hb_007709_020 Hb_028872_040--Hb_138667_010 Hb_028872_040--Hb_000280_120 Hb_000243_050 Hb_000243_050 Hb_028872_040--Hb_000243_050 Hb_003938_100 Hb_003938_100 Hb_028872_040--Hb_003938_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.322016 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.487534 0.282946

CAGE analysis