Hb_011552_020

Information

Type -
Description -
Location Contig11552: 33655-39921
Sequence    

Annotation

kegg
ID pmum:103341998
description cytochrome P450 CYP749A22-like
nr
ID KHG20729.1
description hypothetical protein F383_28301 [Gossypium arboreum]
swissprot
ID H2DH17
description Cytochrome P450 CYP749A22 OS=Panax ginseng PE=2 SV=1
trembl
ID A0A0B0P9B3
description Uncharacterized protein OS=Gossypium arboreum GN=F383_28301 PE=4 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp749a22-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011552_020 0.0 - - hypothetical protein F383_28301 [Gossypium arboreum]
2 Hb_052186_010 0.0954529332 - - hypothetical protein JCGZ_17055 [Jatropha curcas]
3 Hb_006475_020 0.1289843563 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
4 Hb_108884_020 0.1458918693 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
5 Hb_020581_050 0.1485542708 - - -
6 Hb_001864_010 0.1512455904 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005436_020 0.1583290165 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_132270_010 0.1745739797 - - hypothetical protein JCGZ_25438 [Jatropha curcas]
9 Hb_001902_180 0.1753551717 - - PREDICTED: uncharacterized protein LOC105129658 [Populus euphratica]
10 Hb_000286_190 0.1762071616 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
11 Hb_008503_020 0.1764701379 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
12 Hb_124385_010 0.1795061319 - - hypothetical protein JCGZ_13882 [Jatropha curcas]
13 Hb_004162_040 0.1796413695 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
14 Hb_029508_030 0.1838535211 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
15 Hb_001709_070 0.1855759171 - - carbohydrate binding protein, putative [Ricinus communis]
16 Hb_005797_030 0.1881738135 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
17 Hb_000608_450 0.192432571 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
18 Hb_000221_170 0.1944720046 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
19 Hb_001761_040 0.194803761 - - PREDICTED: beta-amyrin synthase-like [Jatropha curcas]
20 Hb_044313_010 0.1956386552 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011552_020 Hb_011552_020 Hb_052186_010 Hb_052186_010 Hb_011552_020--Hb_052186_010 Hb_006475_020 Hb_006475_020 Hb_011552_020--Hb_006475_020 Hb_108884_020 Hb_108884_020 Hb_011552_020--Hb_108884_020 Hb_020581_050 Hb_020581_050 Hb_011552_020--Hb_020581_050 Hb_001864_010 Hb_001864_010 Hb_011552_020--Hb_001864_010 Hb_005436_020 Hb_005436_020 Hb_011552_020--Hb_005436_020 Hb_001761_040 Hb_001761_040 Hb_052186_010--Hb_001761_040 Hb_132270_010 Hb_132270_010 Hb_052186_010--Hb_132270_010 Hb_008503_020 Hb_008503_020 Hb_052186_010--Hb_008503_020 Hb_052186_010--Hb_001864_010 Hb_151364_010 Hb_151364_010 Hb_052186_010--Hb_151364_010 Hb_044313_010 Hb_044313_010 Hb_006475_020--Hb_044313_010 Hb_006475_020--Hb_020581_050 Hb_002142_010 Hb_002142_010 Hb_006475_020--Hb_002142_010 Hb_032299_070 Hb_032299_070 Hb_006475_020--Hb_032299_070 Hb_018212_020 Hb_018212_020 Hb_006475_020--Hb_018212_020 Hb_000608_450 Hb_000608_450 Hb_108884_020--Hb_000608_450 Hb_000046_060 Hb_000046_060 Hb_108884_020--Hb_000046_060 Hb_009012_020 Hb_009012_020 Hb_108884_020--Hb_009012_020 Hb_000286_190 Hb_000286_190 Hb_108884_020--Hb_000286_190 Hb_004190_010 Hb_004190_010 Hb_108884_020--Hb_004190_010 Hb_000684_020 Hb_000684_020 Hb_108884_020--Hb_000684_020 Hb_020581_050--Hb_108884_020 Hb_020581_050--Hb_001864_010 Hb_029508_030 Hb_029508_030 Hb_020581_050--Hb_029508_030 Hb_020581_050--Hb_000286_190 Hb_005797_030 Hb_005797_030 Hb_001864_010--Hb_005797_030 Hb_001864_010--Hb_029508_030 Hb_002007_230 Hb_002007_230 Hb_001864_010--Hb_002007_230 Hb_000221_170 Hb_000221_170 Hb_001864_010--Hb_000221_170 Hb_001864_010--Hb_000286_190 Hb_001864_010--Hb_008503_020 Hb_005436_020--Hb_132270_010 Hb_000163_310 Hb_000163_310 Hb_005436_020--Hb_000163_310 Hb_007441_030 Hb_007441_030 Hb_005436_020--Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_005436_020--Hb_000703_310 Hb_006364_010 Hb_006364_010 Hb_005436_020--Hb_006364_010 Hb_005228_090 Hb_005228_090 Hb_005436_020--Hb_005228_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0958036 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.169525 0.0260143

CAGE analysis