Hb_151364_010

Information

Type -
Description -
Location Contig151364: 50-603
Sequence    

Annotation

kegg
ID mdm:103452357
description probable LRR receptor-like serine/threonine-protein kinase At3g47570
nr
ID XP_012071397.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A067L2Y9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05022 PE=4 SV=1
Gene Ontology
ID GO:0005515
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151364_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_005489_160 0.0969369538 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
3 Hb_008053_070 0.1039165545 - - PREDICTED: U-box domain-containing protein 33-like isoform X4 [Jatropha curcas]
4 Hb_000300_570 0.1049179535 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
5 Hb_012053_030 0.105288162 - - PREDICTED: GDSL esterase/lipase At5g22810 [Jatropha curcas]
6 Hb_005797_030 0.105827018 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
7 Hb_002007_230 0.106815978 - - PREDICTED: probable linoleate 9S-lipoxygenase 5 [Jatropha curcas]
8 Hb_000265_010 0.1075128201 - - amino acid transporter, putative [Ricinus communis]
9 Hb_001864_010 0.1143049178 - - conserved hypothetical protein [Ricinus communis]
10 Hb_008503_020 0.1143754797 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
11 Hb_003086_200 0.1147498292 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
12 Hb_007666_040 0.1234539618 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
13 Hb_000380_040 0.1237631512 - - bel1 homeotic protein, putative [Ricinus communis]
14 Hb_001489_030 0.1263132355 - - PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Jatropha curcas]
15 Hb_018563_040 0.1267280924 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_000185_060 0.130622232 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
17 Hb_001104_280 0.1328245779 - - PREDICTED: UPF0481 protein At3g47200 [Jatropha curcas]
18 Hb_009083_080 0.1374735936 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000221_170 0.14098836 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
20 Hb_001376_040 0.1422405533 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]

Gene co-expression network

sample Hb_151364_010 Hb_151364_010 Hb_005489_160 Hb_005489_160 Hb_151364_010--Hb_005489_160 Hb_008053_070 Hb_008053_070 Hb_151364_010--Hb_008053_070 Hb_000300_570 Hb_000300_570 Hb_151364_010--Hb_000300_570 Hb_012053_030 Hb_012053_030 Hb_151364_010--Hb_012053_030 Hb_005797_030 Hb_005797_030 Hb_151364_010--Hb_005797_030 Hb_002007_230 Hb_002007_230 Hb_151364_010--Hb_002007_230 Hb_001104_280 Hb_001104_280 Hb_005489_160--Hb_001104_280 Hb_005489_160--Hb_005797_030 Hb_000221_170 Hb_000221_170 Hb_005489_160--Hb_000221_170 Hb_001864_010 Hb_001864_010 Hb_005489_160--Hb_001864_010 Hb_002475_100 Hb_002475_100 Hb_005489_160--Hb_002475_100 Hb_008616_020 Hb_008616_020 Hb_008053_070--Hb_008616_020 Hb_000185_060 Hb_000185_060 Hb_008053_070--Hb_000185_060 Hb_032582_010 Hb_032582_010 Hb_008053_070--Hb_032582_010 Hb_008053_070--Hb_012053_030 Hb_002677_010 Hb_002677_010 Hb_008053_070--Hb_002677_010 Hb_001376_040 Hb_001376_040 Hb_008053_070--Hb_001376_040 Hb_000300_570--Hb_012053_030 Hb_000265_010 Hb_000265_010 Hb_000300_570--Hb_000265_010 Hb_003086_200 Hb_003086_200 Hb_000300_570--Hb_003086_200 Hb_000300_570--Hb_002007_230 Hb_001489_030 Hb_001489_030 Hb_000300_570--Hb_001489_030 Hb_000300_570--Hb_000185_060 Hb_012053_030--Hb_000265_010 Hb_012053_030--Hb_000185_060 Hb_012053_030--Hb_003086_200 Hb_007666_040 Hb_007666_040 Hb_012053_030--Hb_007666_040 Hb_005797_030--Hb_001864_010 Hb_005797_030--Hb_002007_230 Hb_000920_360 Hb_000920_360 Hb_005797_030--Hb_000920_360 Hb_005797_030--Hb_001104_280 Hb_005797_030--Hb_003086_200 Hb_000286_190 Hb_000286_190 Hb_005797_030--Hb_000286_190 Hb_002007_230--Hb_003086_200 Hb_002007_230--Hb_001864_010 Hb_002007_230--Hb_000265_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 12.7704 0.117097 0.880647 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 12.9214 0.854727

CAGE analysis