Hb_000286_190

Information

Type -
Description -
Location Contig286: 166387-168366
Sequence    

Annotation

kegg
ID pop:POPTR_0017s02640g
description kinase family protein
nr
ID XP_012071320.1
description PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
swissprot
ID O04086
description Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1
trembl
ID A0A067KV51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05005 PE=3 SV=1
Gene Ontology
ID GO:0005622
description kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000286_190 0.0 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
2 Hb_000920_360 0.0615074404 - - PREDICTED: (R,S)-reticuline 7-O-methyltransferase-like [Jatropha curcas]
3 Hb_029508_030 0.0882426063 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
4 Hb_005797_030 0.0903590096 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
5 Hb_001864_010 0.0964608668 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004574_010 0.1104717703 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
7 Hb_000608_450 0.1138655489 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
8 Hb_007894_260 0.1156609472 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_000684_020 0.1213973135 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
10 Hb_108884_020 0.1259555339 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
11 Hb_002007_230 0.1268469016 - - PREDICTED: probable linoleate 9S-lipoxygenase 5 [Jatropha curcas]
12 Hb_088916_010 0.1281735029 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
13 Hb_000221_170 0.1282368621 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
14 Hb_006326_030 0.1290862742 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001838_050 0.1361365497 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
16 Hb_012395_070 0.1386391701 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
17 Hb_000177_120 0.1388639815 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
18 Hb_002553_120 0.1408218825 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
19 Hb_003086_200 0.1411344718 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
20 Hb_006569_110 0.1414188018 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000286_190 Hb_000286_190 Hb_000920_360 Hb_000920_360 Hb_000286_190--Hb_000920_360 Hb_029508_030 Hb_029508_030 Hb_000286_190--Hb_029508_030 Hb_005797_030 Hb_005797_030 Hb_000286_190--Hb_005797_030 Hb_001864_010 Hb_001864_010 Hb_000286_190--Hb_001864_010 Hb_004574_010 Hb_004574_010 Hb_000286_190--Hb_004574_010 Hb_000608_450 Hb_000608_450 Hb_000286_190--Hb_000608_450 Hb_000920_360--Hb_005797_030 Hb_000920_360--Hb_029508_030 Hb_000920_360--Hb_000608_450 Hb_088916_010 Hb_088916_010 Hb_000920_360--Hb_088916_010 Hb_000920_360--Hb_001864_010 Hb_000221_170 Hb_000221_170 Hb_029508_030--Hb_000221_170 Hb_029508_030--Hb_001864_010 Hb_001709_070 Hb_001709_070 Hb_029508_030--Hb_001709_070 Hb_000876_050 Hb_000876_050 Hb_029508_030--Hb_000876_050 Hb_005797_030--Hb_001864_010 Hb_002007_230 Hb_002007_230 Hb_005797_030--Hb_002007_230 Hb_001104_280 Hb_001104_280 Hb_005797_030--Hb_001104_280 Hb_003086_200 Hb_003086_200 Hb_005797_030--Hb_003086_200 Hb_001864_010--Hb_002007_230 Hb_001864_010--Hb_000221_170 Hb_008503_020 Hb_008503_020 Hb_001864_010--Hb_008503_020 Hb_001838_050 Hb_001838_050 Hb_004574_010--Hb_001838_050 Hb_003031_030 Hb_003031_030 Hb_004574_010--Hb_003031_030 Hb_012395_070 Hb_012395_070 Hb_004574_010--Hb_012395_070 Hb_002805_150 Hb_002805_150 Hb_004574_010--Hb_002805_150 Hb_004574_010--Hb_088916_010 Hb_108884_020 Hb_108884_020 Hb_000608_450--Hb_108884_020 Hb_010926_030 Hb_010926_030 Hb_000608_450--Hb_010926_030 Hb_009510_060 Hb_009510_060 Hb_000608_450--Hb_009510_060 Hb_000608_450--Hb_005797_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.99434 0.151446 0.429442 0 0.00966855
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.034042 6.07291 0.834624

CAGE analysis